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Report for CCDS44331.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44331.1 Public Homo sapiens 1 C1orf198 24 110 108 CCDS HistoryNCBI Gene:84886Re-query CCDS DB by CCDS ID:44331.1Re-query CCDS DB by GeneID:84886See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44331.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523410.1 ENSP00000430967.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523410.1Link to Ensembl Protein Viewer:ENSP00000430967.1Re-query CCDS DB by Nucleotide ID:ENST00000523410Re-query CCDS DB by Protein ID:ENSP00000430967
Original member Current member NCBI NM_001136495.2 NP_001129967.1 Accepted alive Link to Nucleotide Sequence:NM_001136495.2Link to Protein Sequence:NP_001129967.1Re-query CCDS DB by Nucleotide ID:NM_001136495Re-query CCDS DB by Protein ID:NP_001129967Link to BLAST:NP_001129967.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129967.1 197 Q9H425-2 197 100% 0 0

Chromosomal Locations for CCDS 44331.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 230839852 230839908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230843354 230843890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (594 nt):
ATGGAGTTCAGTATCTCCGCCCTATCCATCCAGGAGCCGAGCAACGGCACCGCCGCCAGCGAGCCCAGAC
CACTGTCCAAAGCTTCCCAGGGCTCCCAGGCCCTCAAGTCCTCCCAAGGCAGCAGGTCCTCCAGCCTGGA
CGCCCTGGGCCCCACCAGGAAGGAGGAGGAAGCGTCATTCTGGAAGATCAATGCTGAGCGGTCCCGAGGG
GAGGGGCCTGAGGCCGAGTTCCAGTCGCTGACCCCTAGCCAGATCAAGTCCATGGAGAAGGGGGAAAAGG
TCTTGCCTCCCTGCTACCGGCAGGAACCTGCCCCGAAGGACAGGGAGGCCAAGGTGGAAAGGCCCAGCAC
CCTCCGTCAGGAGCAGCGTCCTCTTCCCAACGTGAGCACCGAACGTGAGAGACCCCAGCCTGTCCAGGCC
TTCAGCAGTGCACTGCACGAGGCTGCCCCCTCCCAGCTCGAGGGGAAGCTGCCATCTCCTGATGTCAGGC
AGGACGATGGGGAAGACACCCTGTTCTCGGAACCCAAGTTTGCACAGGTCAGCTCAAGTAATGTCGTCTT
GAAGACGGGATTTGATTTTCTGGACAATTGGTAA

Translation (197 aa):
MEFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRG
EGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQRPLPNVSTERERPQPVQA
FSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFSEPKFAQVSSSNVVLKTGFDFLDNW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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