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Report for CCDS73275.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73275.1 Public Homo sapiens 11 C11orf96 24 110 108 CCDS HistoryNCBI Gene:387763Re-query CCDS DB by CCDS ID:73275.1Re-query CCDS DB by GeneID:387763See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73275.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000617612.3 ENSP00000479976.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000617612.3Link to Ensembl Protein Viewer:ENSP00000479976.1Re-query CCDS DB by Nucleotide ID:ENST00000617612Re-query CCDS DB by Protein ID:ENSP00000479976
Original member Current member NCBI NM_001145033.2 NP_001138505.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145033.2Link to Protein Sequence:NP_001138505.1Re-query CCDS DB by Nucleotide ID:NM_001145033Re-query CCDS DB by Protein ID:NP_001138505Link to BLAST:NP_001138505.1

Chromosomal Locations for CCDS 73275.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 43942905 43943273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (369 nt):
ATGGCCGCCAAGCCCGGCGAGCTGATGGGCATCTGCTCCAGTTACCAGGCGGTGATGCCGCACTTCGTGT
GCCTGGCCGACGAGTTCCCGCAGCCCGTGCGGCCCGCCAAGCTGCCCAAGGGCCGGGGCCGGCTGCGGCG
GCCGCGCCAGTCTCGCTTCAAGACGCAGCCGGTGACCTTCGACGAGATCCAGGAGGTGGAGGAGGAGGGG
GTGTCCCCCATGGAGGAGGAGAAGGCCAAGAAGTCGTTCCTGCAGAGCCTGGAGTGCCTGCGCCGCAGCA
CGCAGAGCCTGTCGCTGCAGCGGGAGCAGCTCAGCAGCTGCAAACTGAGGAACAGCCTGGACTCCAGCGA
CTCCGACTCGGCCCTGTAA

Translation (122 aa):
MAAKPGELMGICSSYQAVMPHFVCLADEFPQPVRPAKLPKGRGRLRRPRQSRFKTQPVTFDEIQEVEEEG
VSPMEEEKAKKSFLQSLECLRRSTQSLSLQREQLSSCKLRNSLDSSDSDSAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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