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Report for CCDS55485.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55485.1 Public Homo sapiens X STEEP1 24 110 108 CCDS HistoryNCBI Gene:63932Re-query CCDS DB by CCDS ID:55485.1Re-query CCDS DB by GeneID:63932See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55485.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000536133.2 ENSP00000441786.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536133.2Link to Ensembl Protein Viewer:ENSP00000441786.1Re-query CCDS DB by Nucleotide ID:ENST00000536133Re-query CCDS DB by Protein ID:ENSP00000441786
Original member Current member NCBI NM_001170570.2 NP_001164041.1 Accepted alive Link to Nucleotide Sequence:NM_001170570.2Link to Protein Sequence:NP_001164041.1Re-query CCDS DB by Nucleotide ID:NM_001170570Re-query CCDS DB by Protein ID:NP_001164041Link to BLAST:NP_001164041.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001164041.1 208 Q9H5V9-3 208 100% 0 0

Chromosomal Locations for CCDS 55485.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 119539727 119539789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119541328 119541420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119542505 119542594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119544353 119544491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119560268 119560385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119565232 119565355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (627 nt):
ATGCCGAAAGTAGTGTCTCGGTCAGTAGTCTGCTCTGACACTCGGGACCGGGAGGAATATGACGACGGCG
AGAAGCCCCTCCATGTTTACTACTGTTTGTGCGGCCAGATGGTCCTAGTGCTGGACTGCCAGTTAGAGAA
ATTGCCCATGAGGCCCCGGGACCGGTCCCGTGTGATTGATGCTGCCAAACATGCCCATAAGTTTTGTAAC
ACAGAAGATGAGGAGACTATGTATCTGCGGAGGTGTGGACTGCCGCTCTTCTACCAATCCCAGCCAAAGA
ATGCTCCTGTTACCTTCATTGTGGATGGAGCAGTAGTCAAGTTTGGCCAGGGCTTTGGGAAAACGAACAT
ATATACTCAGAAACAAGAGCCTCCTAAGAAGGTGATGATGACCAAACGGACCAAAGACATGGGCAAGTTC
AGTTCTGTCACCGTGTCTACCATTGATGAAGAGGAAGAGGAGATTGAGGCTAGGGAAGTTGCTGACTCAT
ATGCACAGAATGCCAAAGTGATTGAAAAACAGCTGGAGCGCAAAGGCATGAGCAAGAGGCGACTGCAAGA
GCTGGCTGAATTGGAAGCCAAGAAAGCGAAAATGAAGGGGACCTTGATTGACAACCAGTTCAAATAA

Translation (208 aa):
MPKVVSRSVVCSDTRDREEYDDGEKPLHVYYCLCGQMVLVLDCQLEKLPMRPRDRSRVIDAAKHAHKFCN
TEDEETMYLRRCGLPLFYQSQPKNAPVTFIVDGAVVKFGQGFGKTNIYTQKQEPPKKVMMTKRTKDMGKF
SSVTVSTIDEEEEEIEAREVADSYAQNAKVIEKQLERKGMSKRRLQELAELEAKKAKMKGTLIDNQFK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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