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Report for CCDS56403.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56403.1 Public Homo sapiens 6 BTN2A2 24 110 108 CCDS HistoryNCBI Gene:10385Re-query CCDS DB by CCDS ID:56403.1Re-query CCDS DB by GeneID:10385See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56403.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000482536.5 ENSP00000419451.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000482536.5Link to Ensembl Protein Viewer:ENSP00000419451.1Re-query CCDS DB by Nucleotide ID:ENST00000482536Re-query CCDS DB by Protein ID:ENSP00000419451
Original member Current member NCBI NM_001197239.2 NP_001184168.1 Accepted alive Link to Nucleotide Sequence:NM_001197239.2Link to Protein Sequence:NP_001184168.1Re-query CCDS DB by Nucleotide ID:NM_001197239Re-query CCDS DB by Protein ID:NP_001184168Link to BLAST:NP_001184168.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001184168.1 313 Q8WVV5-5 313 100% 0 0

Chromosomal Locations for CCDS 56403.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 26383822 26383915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26390005 26390211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26390687 26390707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26390803 26390829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 26392375 26392967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGGAACCAGCTGCTGCTCTGCACTTCTCCCTGCCAGCCTCCCTCCTCCTCCTCCTGCTCCTCCTCCTTC
TCAGCCTGTGTGCACTGGTCTCAGAATCCTTTATGCCCAGCGCATCTCCCTGGATGGTGGCCCTAGCTGT
CATCCTGACCGCATCTCCCTGGATGGTGTCCATGACTGTCATCCTGGCTGTTTTCATCATCTTCATGGCT
GTCAGCATCTGTTGCATCAAGAAACTTCAAAGGGAAAAAAAGATTCTGTCAGGGGAAAAGAAAGTTGAAC
AAGAGGAAAAAGAAATTGCACAGCAACTTCAAGAAGAATTGCGATGGAGAAGAACATTCTTACATGCTGC
TGATGTGGTCCTGGATCCAGACACCGCTCATCCCGAGCTCTTCCTGTCAGAGGACCGGAGAAGTGTGAGG
CGGGGCCCCTACAGGCAGAGAGTGCCTGACAACCCAGAGAGATTCGACAGTCAGCCTTGTGTCCTGGGAT
GGGAGAGCTTCGCCTCAGGGAAACATTACTGGGAGGTGGAGGTGGAAAACGTGATGGTGTGGACTGTGGG
GGTCTGCAGACACAGTGTTGAGAGGAAAGGGGAGGTCCTGCTGATTCCTCAGAATGGCTTCTGGACCCTG
GAGATGTTTGGAAACCAATACCGGGCCCTGTCCTCCCCTGAGAGGATTCTCCCTTTGAAGGAGTCCCTTT
GCCGGGTGGGCGTCTTCCTGGACTATGAAGCTGGAGATGTCTCCTTCTACAACATGAGGGACAGATCGCA
CATCTACACATGTCCCCGTTCAGCCTTTACTGTGCCTGTGAGGCCCTTCTTCAGGTTAGGGTCTGATGAC
AGCCCCATCTTCATCTGCCCTGCACTCACAGGAGCCAGTGGGGTCATGGTGCCTGAAGAGGGCCTGAAAC
TTCACAGAGTGGGGACCCACCAGAGCCTATAG

Translation (313 aa):
MEPAAALHFSLPASLLLLLLLLLLSLCALVSESFMPSASPWMVALAVILTASPWMVSMTVILAVFIIFMA
VSICCIKKLQREKKILSGEKKVEQEEKEIAQQLQEELRWRRTFLHAADVVLDPDTAHPELFLSEDRRSVR
RGPYRQRVPDNPERFDSQPCVLGWESFASGKHYWEVEVENVMVWTVGVCRHSVERKGEVLLIPQNGFWTL
EMFGNQYRALSSPERILPLKESLCRVGVFLDYEAGDVSFYNMRDRSHIYTCPRSAFTVPVRPFFRLGSDD
SPIFICPALTGASGVMVPEEGLKLHRVGTHQSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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