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Report for CCDS14316.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
14316.1 |
Public |
Homo sapiens |
X |
CCDC120 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:90060](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:14316.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:90060](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome X in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 14316.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000597275.5 |
ENSP00000470294.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000597275.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000470294.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000597275](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000470294](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000496529.6 |
ENSP00000474761.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000496529.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000474761.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000496529](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000474761](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000606812.5 |
ENSP00000475676.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000606812.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000475676.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000606812](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000475676](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001271835.1 |
NP_001258764.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001271835.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001258764.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001271835](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001258764](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001258764.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001271836.2 |
NP_001258765.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001271836.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001258765.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001271836](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001258765](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001258765.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_033626.3 |
NP_296375.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_033626.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_296375.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_033626](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_296375](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_296375.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 14316.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1893 nt): ATGGAAGTCAAAGGTCAGCTGATCAGCTCTCCTACCTTCAATGCCCCAGCTGCCCTGTTCGGAGAGGCTG CCCCCCAGGTGAAGTCAGAGCGTCTGCGGGGGCTGCTTGACCGGCAGCGGACCCTGCAGGAGGCCCTGAG CCTGAAACTTCAGGAGCTCCGCAAAGTGTGTCTCCAGGAGGCGGAGCTGACTGGCCAGCTGCCCCCTGAG TGCCCACTAGAGCCTGGTGAACGGCCCCAGTTGGTCCGCCGGCGGCCCCCCACAGCCCGCGCCTACCCTC CACCGCACCCCAACCAAGCACACCACTCCTTGTGCCCTGCTGAGGAGCTGGCTCTTGAGGCCCTGGAACG CGAGGTGTCAGTGCAACAGCAGATCGCGGCGGCCGCCCGCCGCCTGGCCTTGGCCCCTGATCTGAGCACC GAGCAGCGCCGGCGCCGGCGCCAGGTCCAGGCAGATGCACTGAGGAGGCTGCATGAGCTAGAGGAGCAGC TCAGGGATGTCCGGGCCCGCCTTGGCCTCCCAGTGCTCCCGCTGCCCCAGCCACTGCCACTGTCCACGGG GTCAGTGATCACCACCCAGGGAGTCTGCCTGGGCATGCGTCTTGCTCAGCTCAGCCAAGAGGACGTAGTT CTGCACTCAGAGAGCAGCTCCCTCTCAGAGTCTGGGGCCAGCCATGACAACGAGGAGCCCCATGGCTGCT TCTCTCTGGCCGAGCGCCCCTCACCACCCAAGGCTTGGGACCAGCTGCGGGCAGTATCTGGGGGGAGCCC TGAGCGGCGAACCCCATGGAAACCACCTCCATCAGATCTTTATGGGGATCTGAAGAGCCGGCGGAACTCT GTGGCCAGCCCCACCAGCCCCACACGCTCGCTGCCCAGGAGTGCCTCCAGTTTTGAGGGGCGAAGTGTGC CTGCCACCCCTGTCCTCACCCGGGGCGCTGGCCCCCAGCTCTGCAAACCTGAAGGCCTTCATTCTCGTCA GTGGTCCGGCAGCCAGGACTCCCAGATGGGCTTCCCCCGGGCGGACCCTGCCTCCGATCGCGCCTCCCTC TTCGTAGCTCGCACCCGCCGCAGCAACAGTTCTGAGGCCCTGCTGGTGGACCGGGCCGCTGGTGGGGGAG CTGGCTCCCCGCCTGCCCCTCTGGCTCCCTCTGCCTCTGGCCCCCCAGTCTGCAAGAGCAGTGAGGTGCT GTATGAGCGCCCCCAACCAACCCCTGCCTTCTCCTCCCGCACAGCAGGCCCCCCAGACCCTCCCCGGGCC GCCCGGCCTAGCTCAGCTGCCCCTGCCTCCCGAGGTGCCCCCCGGCTCCCACCTGTGTGTGGAGACTTCC TCTTGGACTATTCCTTGGACCGGGGCCTGCCCCGCAGTGGCGGTGGAACAGGCTGGGGGGAGCTGCCGCC TGCAGCTGAGGTCCCAGGACCCCTCTCCCGCCGGGATGGGCTCCTCACCATGCTCCCCGGCCCACCACCT GTGTATGCAGCTGACAGCAACAGCCCCCTCCTCCGCACCAAGGACCCCCACACCCGTGCCACCCGCACTA AGCCCTGTGGCCTGCCCCCAGAGGCTGCCGAAGGCCCTGAGGTGCATCCAAACCCTCTGCTGTGGATGCC CCCACCCACCCGTATCCCCTCGGCTGGTGAACGCAGTGGCCACAAGAACCTGGCTCTGGAGGGGCTGCGG GACTGGTACATCCGGAACTCGGGACTGGCTGCGGGGCCCCAGCGCCGGCCTGTGCTCCCTTCCGTGGGCC CGCCACACCCACCCTTCCTCCATGCCCGCTGCTATGAGGTGGGCCAGGCGCTGTACGGGGCCCCCAGCCA GGCGCCACTCCCACACTCGAGGAGTTTCACGGCGCCCCCTGTCTCTGGCAGGTATGGGGGGTGCTTTTAC TGA
Translation (630 aa): MEVKGQLISSPTFNAPAALFGEAAPQVKSERLRGLLDRQRTLQEALSLKLQELRKVCLQEAELTGQLPPE CPLEPGERPQLVRRRPPTARAYPPPHPNQAHHSLCPAEELALEALEREVSVQQQIAAAARRLALAPDLST EQRRRRRQVQADALRRLHELEEQLRDVRARLGLPVLPLPQPLPLSTGSVITTQGVCLGMRLAQLSQEDVV LHSESSSLSESGASHDNEEPHGCFSLAERPSPPKAWDQLRAVSGGSPERRTPWKPPPSDLYGDLKSRRNS VASPTSPTRSLPRSASSFEGRSVPATPVLTRGAGPQLCKPEGLHSRQWSGSQDSQMGFPRADPASDRASL FVARTRRSNSSEALLVDRAAGGGAGSPPAPLAPSASGPPVCKSSEVLYERPQPTPAFSSRTAGPPDPPRA ARPSSAAPASRGAPRLPPVCGDFLLDYSLDRGLPRSGGGTGWGELPPAAEVPGPLSRRDGLLTMLPGPPP VYAADSNSPLLRTKDPHTRATRTKPCGLPPEAAEGPEVHPNPLLWMPPPTRIPSAGERSGHKNLALEGLR DWYIRNSGLAAGPQRRPVLPSVGPPHPPFLHARCYEVGQALYGAPSQAPLPHSRSFTAPPVSGRYGGCFY
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