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Report for CCDS73316.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73316.1 Public Homo sapiens 11 MAJIN 24 110 108 CCDS HistoryNCBI Gene:283129Re-query CCDS DB by CCDS ID:73316.1Re-query CCDS DB by GeneID:283129See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73316.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000530444.5 ENSP00000434568.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000530444.5Link to Ensembl Protein Viewer:ENSP00000434568.1Re-query CCDS DB by Nucleotide ID:ENST00000530444Re-query CCDS DB by Protein ID:ENSP00000434568
Original member Current member NCBI NM_001300803.2 NP_001287732.1 Accepted alive Link to Nucleotide Sequence:NM_001300803.2Link to Protein Sequence:NP_001287732.1Re-query CCDS DB by Nucleotide ID:NM_001300803Re-query CCDS DB by Protein ID:NP_001287732Link to BLAST:NP_001287732.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287732.1 176 Q3KP22-1 176 100% 0 0

Chromosomal Locations for CCDS 73316.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 64938525 64938573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64939662 64939767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64940574 64940646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64946090 64946153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64947374 64947465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64954757 64954802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64959305 64959405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGAGTTTAAAACCCTTTACCTACCCGTTTCCAGAGACGAGGTTTCTTCATGCAGGACCCAATGTGTATA
AATTCAAAATCAGATATGGGAAGAGTATCAGAGGAGAAGAGATAGAAAATAAGGAAGTCATCACCCAGGA
GCTGGAGGTCCCAGTTGAGAAGAAAGCAGTAGGAGCTGTGATGAGGAAACGAAAACACATGGACGAGCCC
AGCTCCCCCAGCAGGCCAGGGCTGGACAGGGCCAAGATAGGGACTTCCAGCCAAGGCCCCAGCAAAAAGA
AGCCCCCTGTGGAAACCAGGAGAAATAGGGAAAGAAAAACCCAACAAGGATTGCAGGAGACTCTGGCCTC
TGATATCACTGATGTCCAGAAACAAGATTCTGAGTGGGGACACAGCCTGCCAGGGCGAATTGTCCCACCC
CTGCAGCACAACTCACCTCCACCTAAGGAGCGAGCAGCCACCGGCTTCTTTGGGTTTCTAAGCTCTCTCT
TCCCGTTTCGATATTTCTTCAGGAAGAGCAGCCACTCTTGA

Translation (176 aa):
MSLKPFTYPFPETRFLHAGPNVYKFKIRYGKSIRGEEIENKEVITQELEVPVEKKAVGAVMRKRKHMDEP
SSPSRPGLDRAKIGTSSQGPSKKKPPVETRRNRERKTQQGLQETLASDITDVQKQDSEWGHSLPGRIVPP
LQHNSPPPKERAATGFFGFLSSLFPFRYFFRKSSHS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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