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Report for CCDS13626.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13626.1 Public Homo sapiens 21 DNAJC28 24 110 108 CCDS HistoryNCBI Gene:54943Re-query CCDS DB by CCDS ID:13626.1Re-query CCDS DB by GeneID:54943See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13626.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314399.3 ENSP00000320303.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000314399.3Link to Ensembl Protein Viewer:ENSP00000320303.3Re-query CCDS DB by Nucleotide ID:ENST00000314399Re-query CCDS DB by Protein ID:ENSP00000320303
Original member Current member EBI ENST00000381947.4 ENSP00000371373.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381947.4Link to Ensembl Protein Viewer:ENSP00000371373.3Re-query CCDS DB by Nucleotide ID:ENST00000381947Re-query CCDS DB by Protein ID:ENSP00000371373
Original member Current member EBI ENST00000402202.1 ENSP00000385777.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402202.1Link to Ensembl Protein Viewer:ENSP00000385777.1Re-query CCDS DB by Nucleotide ID:ENST00000402202Re-query CCDS DB by Protein ID:ENSP00000385777
Original member Current member EBI ENST00000617313.4 ENSP00000479716.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617313.4Link to Ensembl Protein Viewer:ENSP00000479716.1Re-query CCDS DB by Nucleotide ID:ENST00000617313Re-query CCDS DB by Protein ID:ENSP00000479716
Original member Current member NCBI NM_001040192.3 NP_001035282.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001040192.3Link to Protein Sequence:NP_001035282.1Re-query CCDS DB by Nucleotide ID:NM_001040192Re-query CCDS DB by Protein ID:NP_001035282Link to BLAST:NP_001035282.1
Original member Current member NCBI NM_001320746.3 NP_001307675.1 Accepted alive Link to Nucleotide Sequence:NM_001320746.3Link to Protein Sequence:NP_001307675.1Re-query CCDS DB by Nucleotide ID:NM_001320746Re-query CCDS DB by Protein ID:NP_001307675Link to BLAST:NP_001307675.1
Original member Current member NCBI NM_017833.5 NP_060303.2 Accepted alive Link to Nucleotide Sequence:NM_017833.5Link to Protein Sequence:NP_060303.2Re-query CCDS DB by Nucleotide ID:NM_017833Re-query CCDS DB by Protein ID:NP_060303Link to BLAST:NP_060303.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035282.1 388 Q9NX36 388 100% 0 0
NP_001307675.1 388 Q9NX36 388 100% 0 0
NP_060303.2 388 Q9NX36 388 100% 0 0

Chromosomal Locations for CCDS 13626.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 33488227 33489393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1167 nt):
ATGAATACAATGTATGTGATGATGGCTCAGATCTTAAGATCTCACCTGATAAAGGCTACAGTGATTCCTA
ATCGAGTGAAAATGCTTCCATATTTTGGTATCATTAGAAATAGAATGATGTCAACCCATAAATCCAAAAA
GAAGATCAGAGAATATTATAGACTGCTGAACGTGGAGGAAGGATGCTCTGCAGATGAAGTCAGGGAATCT
TTTCATAAGCTTGCCAAGCAATATCATCCTGACAGTGGCTCTAATACTGCTGATTCTGCAACATTTATAA
GGATTGAAAAAGCTTATAGAAAGGTGCTCTCCCATGTGATAGAACAAACAAATGCCAGTCAGAGTAAAGG
TGAAGAAGAAGAAGATGTAGAAAAATTCAAATATAAAACACCCCAACACCGACATTATTTAAGTTTTGAA
GGTATTGGTTTTGGGACTCCAACTCAACGAGAGAAGCATTATAGGCAATTTAGGGCAGACCGTGCTGCTG
AACAAGTGATGGAATATCAAAAGCAGAAACTACAAAGCCAGTATTTTCCTGATAGTGTAATTGTTAAAAA
TATAAGACAGAGCAAACAGCAAAAGATAACGCAAGCTATAGAACGTTTAGTGGAGGACCTCATTCAAGAA
TCCATGGCAAAAGGAGACTTTGACAATCTCAGTGGGAAAGGAAAACCTCTGAAAAAGTTTTCTGACTGTT
CTTACATTGATCCCATGACTCACAACCTGAACCGAATACTGATCGATAATGGATACCAACCAGAATGGAT
CCTTAAGCAAAAGGAAATAAGCGATACTATTGAGCAACTCAGAGAGGCAATTTTAGTGTCTAGGAAAAAA
CTTGGGAATCCAATGACACCAACTGAAAAGAAACAGTGGAACCATGTTTGTGAGCAGTTTCAAGAAAACA
TCAGAAAATTAAACAAGCGAATTAATGATTTTAATTTAATTGTTCCCATCCTGACCAGGCAAAAAGTCCA
TTTTGATGCTCAGAAAGAAATTGTCAGAGCCCAGAAAATATACGAGACCCTTATAAAAACAAAAGAAGTC
ACAGATAGAAACCCAAATAACCTTGATCAAGGAGAAGGAGAGAAAACACCTGAAATCAAGAAAGGTTTTT
TAAACTGGATGAATCTGTGGAAATTTATTAAAATACGATCATTTTGA

Translation (388 aa):
MNTMYVMMAQILRSHLIKATVIPNRVKMLPYFGIIRNRMMSTHKSKKKIREYYRLLNVEEGCSADEVRES
FHKLAKQYHPDSGSNTADSATFIRIEKAYRKVLSHVIEQTNASQSKGEEEEDVEKFKYKTPQHRHYLSFE
GIGFGTPTQREKHYRQFRADRAAEQVMEYQKQKLQSQYFPDSVIVKNIRQSKQQKITQAIERLVEDLIQE
SMAKGDFDNLSGKGKPLKKFSDCSYIDPMTHNLNRILIDNGYQPEWILKQKEISDTIEQLREAILVSRKK
LGNPMTPTEKKQWNHVCEQFQENIRKLNKRINDFNLIVPILTRQKVHFDAQKEIVRAQKIYETLIKTKEV
TDRNPNNLDQGEGEKTPEIKKGFLNWMNLWKFIKIRSF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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