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Report for CCDS87568.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87568.1 Public Homo sapiens 7 ACTR3B 24 110 108 CCDS HistoryNCBI Gene:57180Re-query CCDS DB by CCDS ID:87568.1Re-query CCDS DB by GeneID:57180See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87568.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397282.2 ENSP00000380452.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397282.2Link to Ensembl Protein Viewer:ENSP00000380452.2Re-query CCDS DB by Nucleotide ID:ENST00000397282Re-query CCDS DB by Protein ID:ENSP00000380452
Original member Current member NCBI NM_001350940.2 NP_001337869.1 Accepted alive Link to Nucleotide Sequence:NM_001350940.2Link to Protein Sequence:NP_001337869.1Re-query CCDS DB by Nucleotide ID:NM_001350940Re-query CCDS DB by Protein ID:NP_001337869Link to BLAST:NP_001337869.1
Original member Current member NCBI NM_001350941.2 NP_001337870.1 Accepted alive Link to Nucleotide Sequence:NM_001350941.2Link to Protein Sequence:NP_001337870.1Re-query CCDS DB by Nucleotide ID:NM_001350941Re-query CCDS DB by Protein ID:NP_001337870Link to BLAST:NP_001337870.1
Original member Current member NCBI NM_001350942.2 NP_001337871.1 Accepted alive Link to Nucleotide Sequence:NM_001350942.2Link to Protein Sequence:NP_001337871.1Re-query CCDS DB by Nucleotide ID:NM_001350942Re-query CCDS DB by Protein ID:NP_001337871Link to BLAST:NP_001337871.1
Original member Current member NCBI NM_001350943.2 NP_001337872.1 Accepted alive Link to Nucleotide Sequence:NM_001350943.2Link to Protein Sequence:NP_001337872.1Re-query CCDS DB by Nucleotide ID:NM_001350943Re-query CCDS DB by Protein ID:NP_001337872Link to BLAST:NP_001337872.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001337869.1 330 Q9P1U1-2 330 100% 0 0
NP_001337870.1 330 Q9P1U1-2 330 100% 0 0
NP_001337871.1 330 Q9P1U1-2 330 100% 0 0
NP_001337872.1 330 Q9P1U1-2 330 100% 0 0

Chromosomal Locations for CCDS 87568.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 152801660 152801731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 152814550 152814645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 152816481 152816588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 152820299 152820442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 152823342 152823515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 152825030 152825122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 152852126 152852251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 152853494 152853577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 152854458 152854553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (993 nt):
ATGGAAAGGTTCATGGAGCAAGTGGTTTTTAAATATCTTCGAGCTGAACCTGAGGACCATTATTTTTTAA
TGACAGAACCTCCACTCAATACACCAGAAAACAGAGAGTATCTTGCAGAAATTATGTTTGAATCATTTAA
CGTACCAGGACTCTACATTGCAGTTCAGGCAGTGCTGGCCTTGGCGGCATCTTGGACATCTCGACAAGTG
GGTGAACGTACGTTAACGGGGATAGTCATTGACAGCGGAGATGGAGTCACCCATGTTATCCCAGTGGCAG
AAGGTTATGTAATTGGAAGCTGCATCAAACACATCCCGATTGCAGGTAGAGATATTACGTATTTCATTCA
ACAGCTGCTAAGGGAGAGGGAGGTGGGAATCCCTCCTGAGCAGTCACTGGAGACCGCAAAAGCCATTAAG
GAGAAATACTGTTACATTTGCCCCGATATAGTCAAGGAATTTGCCAAGTATGATGTGGATCCCCGGAAGT
GGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAGTTTGTTATAGACGTTGGTTACGAAAG
ATTCCTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGGAGTCCATCTCAGAT
GTTGTTGATGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGCCCGCTGTATAAGAATGTCGTACTCT
CAGGAGGCTCCACCATGTTCAGGGATTTCGGACGCCGACTGCAGAGGGATTTGAAGAGAGTGGTGGATGC
TAGGCTGAGGCTCAGCGAGGAGCTCAGCGGCGGGAGGATCAAGCCGAAGCCTGTGGAGGTCCAGGTGGTC
ACGCATCACATGCAGCGCTACGCCGTGTGGTTCGGAGGCTCCATGCTGGCCTCGACTCCCGAGTTCTTTC
AGGTCTGCCACACCAAGAAGGACTATGAAGAGTACGGGCCCAGCATCTGCCGCCACAACCCCGTCTTTGG
AGTCATGTCCTAG

Translation (330 aa):
MERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQV
GERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIK
EKYCYICPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISD
VVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVV
THHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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