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Report for CCDS46487.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46487.1 Public Homo sapiens 2 CFLAR 24 110 108 CCDS HistoryNCBI Gene:8837Re-query CCDS DB by CCDS ID:46487.1Re-query CCDS DB by GeneID:8837See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46487.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341222.10 ENSP00000339335.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341222.10Link to Ensembl Protein Viewer:ENSP00000339335.6Re-query CCDS DB by Nucleotide ID:ENST00000341222Re-query CCDS DB by Protein ID:ENSP00000339335
Original member Current member EBI ENST00000440180.5 ENSP00000406775.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000440180.5Link to Ensembl Protein Viewer:ENSP00000406775.1Re-query CCDS DB by Nucleotide ID:ENST00000440180Re-query CCDS DB by Protein ID:ENSP00000406775
Original member Current member NCBI NM_001127184.4 NP_001120656.1 Accepted alive Link to Nucleotide Sequence:NM_001127184.4Link to Protein Sequence:NP_001120656.1Re-query CCDS DB by Nucleotide ID:NM_001127184Re-query CCDS DB by Protein ID:NP_001120656Link to BLAST:NP_001120656.1
Original member Current member NCBI NM_001351591.2 NP_001338520.1 Accepted alive Link to Nucleotide Sequence:NM_001351591.2Link to Protein Sequence:NP_001338520.1Re-query CCDS DB by Nucleotide ID:NM_001351591Re-query CCDS DB by Protein ID:NP_001338520Link to BLAST:NP_001338520.1
Original member Current member NCBI NM_001351592.2 NP_001338521.1 Accepted alive Link to Nucleotide Sequence:NM_001351592.2Link to Protein Sequence:NP_001338521.1Re-query CCDS DB by Nucleotide ID:NM_001351592Re-query CCDS DB by Protein ID:NP_001338521Link to BLAST:NP_001338521.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001120656.1 221 O15519-2 221 100% 0 0
NP_001338520.1 221 O15519-2 221 100% 0 0
NP_001338521.1 221 O15519-2 221 100% 0 0

Chromosomal Locations for CCDS 46487.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 201129866 201130146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201133029 201133134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201135972 201136107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201140357 201140439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 201141374 201141433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (666 nt):
ATGTCTGCTGAAGTCATCCATCAGGTTGAAGAAGCACTTGATACAGATGAGAAGGAGATGCTGCTCTTTT
TGTGCCGGGATGTTGCTATAGATGTGGTTCCACCTAATGTCAGGGACCTTCTGGATATTTTACGGGAAAG
AGGTAAGCTGTCTGTCGGGGACTTGGCTGAACTGCTCTACAGAGTGAGGCGATTTGACCTGCTCAAACGT
ATCTTGAAGATGGACAGAAAAGCTGTGGAGACCCACCTGCTCAGGAACCCTCACCTTGTTTCGGACTATA
GAGTGCTGATGGCAGAGATTGGTGAGGATTTGGATAAATCTGATGTGTCCTCATTAATTTTCCTCATGAA
GGATTACATGGGCCGAGGCAAGATAAGCAAGGAGAAGAGTTTCTTGGACCTTGTGGTTGAGTTGGAGAAA
CTAAATCTGGTTGCCCCAGATCAACTGGATTTATTAGAAAAATGCCTAAAGAACATCCACAGAATAGACC
TGAAGACAAAAATCCAGAAGTACAAGCAGTCTGTTCAAGGAGCAGGGACAAGTTACAGGAATGTTCTCCA
AGCAGCAATCCAAAAGAGTCTCAAGGATCCTTCAAATAACTTCAGGATGATAACACCCTATGCCCATTGT
CCTGATCTGAAAATTCTTGGAAATTGTTCCATGTGA

Translation (221 aa):
MSAEVIHQVEEALDTDEKEMLLFLCRDVAIDVVPPNVRDLLDILRERGKLSVGDLAELLYRVRRFDLLKR
ILKMDRKAVETHLLRNPHLVSDYRVLMAEIGEDLDKSDVSSLIFLMKDYMGRGKISKEKSFLDLVVELEK
LNLVAPDQLDLLEKCLKNIHRIDLKTKIQKYKQSVQGAGTSYRNVLQAAIQKSLKDPSNNFRMITPYAHC
PDLKILGNCSM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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