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Report for CCDS44581.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44581.1 Public Homo sapiens 11 CHRM4 24 110 108 CCDS HistoryNCBI Gene:1132Re-query CCDS DB by CCDS ID:44581.1Re-query CCDS DB by GeneID:1132See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44581.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000433765.3 ENSP00000409378.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000433765.3Link to Ensembl Protein Viewer:ENSP00000409378.2Re-query CCDS DB by Nucleotide ID:ENST00000433765Re-query CCDS DB by Protein ID:ENSP00000409378
Original member Current member EBI ENST00000682254.1 ENSP00000507561.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000682254.1Link to Ensembl Protein Viewer:ENSP00000507561.1Re-query CCDS DB by Nucleotide ID:ENST00000682254Re-query CCDS DB by Protein ID:ENSP00000507561
Original member Current member NCBI NM_000741.5 NP_000732.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000741.5Link to Protein Sequence:NP_000732.2Re-query CCDS DB by Nucleotide ID:NM_000741Re-query CCDS DB by Protein ID:NP_000732Link to BLAST:NP_000732.2
Original member Current member NCBI NM_001366692.2 NP_001353621.1 Accepted alive Link to Nucleotide Sequence:NM_001366692.2Link to Protein Sequence:NP_001353621.1Re-query CCDS DB by Nucleotide ID:NM_001366692Re-query CCDS DB by Protein ID:NP_001353621Link to BLAST:NP_001353621.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000732.2 479 P08173 479 100% 0 0
NP_001353621.1 479 P08173 479 100% 0 0

Chromosomal Locations for CCDS 44581.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 46385118 46386557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1440 nt):
ATGGCCAACTTCACACCTGTCAATGGCAGCTCGGGCAATCAGTCCGTGCGCCTGGTCACGTCATCATCCC
ACAATCGCTATGAGACGGTGGAAATGGTCTTCATTGCCACAGTGACAGGCTCCCTGAGCCTGGTGACTGT
CGTGGGCAACATCCTGGTGATGCTGTCCATCAAGGTCAACAGGCAGCTGCAGACAGTCAACAACTACTTC
CTCTTCAGCCTGGCGTGTGCTGATCTCATCATAGGCGCCTTCTCCATGAACCTCTACACCGTGTACATCA
TCAAGGGCTACTGGCCCCTGGGCGCCGTGGTCTGCGACCTGTGGCTGGCCCTGGACTACGTGGTGAGCAA
CGCCTCCGTCATGAACCTTCTCATCATCAGCTTTGACCGCTACTTCTGCGTCACCAAGCCTCTCACCTAC
CCTGCCCGGCGCACCACCAAGATGGCAGGCCTCATGATTGCTGCTGCCTGGGTACTGTCCTTCGTGCTCT
GGGCGCCTGCCATCTTGTTCTGGCAGTTTGTGGTGGGTAAGCGGACGGTGCCCGACAACCAGTGCTTCAT
CCAGTTCCTGTCCAACCCAGCAGTGACCTTTGGCACAGCCATTGCTGCCTTCTACCTGCCTGTGGTCATC
ATGACGGTGCTGTACATCCACATCTCCCTGGCCAGTCGCAGCCGAGTCCACAAGCACCGGCCCGAGGGCC
CGAAGGAGAAGAAAGCCAAGACGCTGGCCTTCCTCAAGAGCCCACTAATGAAGCAGAGCGTCAAGAAGCC
CCCGCCCGGGGAGGCCGCCCGGGAGGAGCTGCGCAATGGCAAGCTGGAGGAGGCCCCCCCGCCAGCGCTG
CCACCGCCACCGCGCCCCGTGGCTGATAAGGACACTTCCAATGAGTCCAGCTCAGGCAGTGCCACCCAGA
ACACCAAGGAACGCCCAGCCACAGAGCTGTCCACCACAGAGGCCACCACGCCCGCCATGCCCGCCCCTCC
CCTGCAGCCGCGGGCCCTCAACCCAGCCTCCAGATGGTCCAAGATCCAGATTGTGACGAAGCAGACAGGC
AATGAGTGTGTGACAGCCATTGAGATTGTGCCTGCCACGCCGGCTGGCATGCGCCCTGCGGCCAACGTGG
CCCGCAAGTTCGCCAGCATCGCTCGCAACCAGGTGCGCAAGAAGCGGCAGATGGCGGCCCGGGAGCGCAA
AGTGACACGAACGATCTTTGCCATTCTGCTAGCCTTCATCCTCACCTGGACGCCCTACAACGTCATGGTC
CTGGTGAACACCTTCTGCCAGAGCTGCATCCCTGACACGGTGTGGTCCATTGGCTACTGGCTCTGCTACG
TCAACAGCACCATCAACCCTGCCTGCTATGCTCTGTGCAACGCCACCTTTAAAAAGACCTTCCGGCACCT
GCTGCTGTGCCAGTATCGGAACATCGGCACTGCCAGGTAG

Translation (479 aa):
MANFTPVNGSSGNQSVRLVTSSSHNRYETVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYF
LFSLACADLIIGAFSMNLYTVYIIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTY
PARRTTKMAGLMIAAAWVLSFVLWAPAILFWQFVVGKRTVPDNQCFIQFLSNPAVTFGTAIAAFYLPVVI
MTVLYIHISLASRSRVHKHRPEGPKEKKAKTLAFLKSPLMKQSVKKPPPGEAAREELRNGKLEEAPPPAL
PPPPRPVADKDTSNESSSGSATQNTKERPATELSTTEATTPAMPAPPLQPRALNPASRWSKIQIVTKQTG
NECVTAIEIVPATPAGMRPAANVARKFASIARNQVRKKRQMAARERKVTRTIFAILLAFILTWTPYNVMV
LVNTFCQSCIPDTVWSIGYWLCYVNSTINPACYALCNATFKKTFRHLLLCQYRNIGTAR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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