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Report for CCDS86030.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
86030.1 |
Public |
Homo sapiens |
1 |
FIRRM |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:55732](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:86030.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:55732](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 1 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 86030.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000413811.3 |
ENSP00000389257.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000413811.3](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000389257.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000413811](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000389257](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001363739.2 |
NP_001350668.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001363739.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001350668.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001363739](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001350668](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001350668.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001366771.1 |
NP_001353700.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001366771.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001353700.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001366771](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001353700](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001353700.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001366772.1 |
NP_001353701.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001366772.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001353701.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001366772](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001353701](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001353701.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001366773.1 |
NP_001353702.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001366773.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001353702.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001366773](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001353702](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001353702.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 86030.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1593 nt): ATGCAGGTGGTTTTGGACAGTAAATTAGACCTGCCATGTGAACTGCAGTTTCCACAATGTCTTCTTCTGG TTGTTGTCATGGATAAGCTGCCATCTCAGCCTAAGGAAGTGCAAACCCTGTGGTGCACAGACAGCCAGGT CTCAGAAACGACAACCAGGATATCTCTACTCAAAGCCGTTTTCTACAGTTTTGAGCAGTGTTCTGGTGAA CTCTCTCTACCTGTTCATTTACAGGGATTAAAGAGTAAGGGGAAAGCTGAGGTGGCTGTCACCTTGTATC AGCATGTTTGTGTTCATCTGTGTACATTTATTACTTCCTTTCATCCCTCACTGTTTGCTGAACTGGATGC TGCTCTGCTGAATGCTGTACTTAGTGCTAATATGATCACCTCTTTGTTAGCTATGGATGCATGGTGCTTC CTTGCTCGATATGGGACTGCTGAACTGTGTGCACACCATGTCACCATAGTGGCTCATCTGATAAAGTCAT GCCCTGGAGAATGTTATCAACTCATCAACCTATCAATACTGTTGAAGCGTCTCTTTTTCTTCATGGCACC ACCCCATCAGCTGGAGTTTATCCAGAAATTTTCCCCAAAAGAAGCAGAAAATCTGCCTCTGTGGCAACAT ATTTCCTTCCAGGCGTTACCTCCTGAGCTTAGGGAACAAACTGTCCATGAGGTCACCACAGTAGGCACTG CAGAATGCAGGAAATGGCTGAGCAGGAGTCGTACTTTGGGAGAACTAGAATCTCTGAACACAGTACTGTC TGCTTTGCTTGCAGTATGTAATTCTGCTGGTGAAGCTTTGGATACAGGAAAACAAACTGCAATTATCGAA GTTGTGAGTCAGCTTTGGGCTTTTTTAAACATTAAACAGGTAGCAGATCAACCTTATGTTCAACAGACAT TCAGCCTTTTACTTCCACTGTTGGGATTTTTCATTCAAACTCTAGATCCTAAACTGATACTTCAGGCAGT AACTTTGCAGACCTCGCTACTTAAATTAGAGCTTCCTGACTATGTTCGTTTGGCAATGTTGGATTTTGTA TCTTCTTTAGGAAAACTTTTTATACCTGAAGCTATCCAGGACAGAATTCTGCCCAACCTGTCCTGTATGT TTGCCTTACTGCTAGCTGACAGGAGTTGGCTGCTAGAACAACATACCTTGGAGGCGTTTACTCAGTTCGC TGAGGGAACAAATCATGAAGAGATAGTTCCACAGTGTCTCAGTTCTGAAGAAACTAAGAACAAAGTTGTA TCCTTTCTGGAGAAGACTGGGTTTGTAGATGAAACTGAAGCTGCCAAAGTGGAACGTGTGAAACAGGAAA AAGGTATTTTCTGGGAACCCTTTGCTAATGTGACTGTAGAAGAAGCAAAGAGGTCATCTTTACAGCCTTA TGCAAAAAGAGCTCGTCAGGAGTTCCCCTGGGAAGAAGAGTACAGGTCAGCGCTGCATACAATAGCAGGG GCTTTGGAAGCAACTGAGTCACTACTCCAAAAGGGTCCTGCTCCAGCCTGGCTTTCAATGGAAATGGAGG CGCTCCAAGAAAGGATGGATAAGCTAAAACGTTACATACATACTCTAGGGTGA
Translation (530 aa): MQVVLDSKLDLPCELQFPQCLLLVVVMDKLPSQPKEVQTLWCTDSQVSETTTRISLLKAVFYSFEQCSGE LSLPVHLQGLKSKGKAEVAVTLYQHVCVHLCTFITSFHPSLFAELDAALLNAVLSANMITSLLAMDAWCF LARYGTAELCAHHVTIVAHLIKSCPGECYQLINLSILLKRLFFFMAPPHQLEFIQKFSPKEAENLPLWQH ISFQALPPELREQTVHEVTTVGTAECRKWLSRSRTLGELESLNTVLSALLAVCNSAGEALDTGKQTAIIE VVSQLWAFLNIKQVADQPYVQQTFSLLLPLLGFFIQTLDPKLILQAVTLQTSLLKLELPDYVRLAMLDFV SSLGKLFIPEAIQDRILPNLSCMFALLLADRSWLLEQHTLEAFTQFAEGTNHEEIVPQCLSSEETKNKVV SFLEKTGFVDETEAAKVERVKQEKGIFWEPFANVTVEEAKRSSLQPYAKRARQEFPWEEEYRSALHTIAG ALEATESLLQKGPAPAWLSMEMEALQERMDKLKRYIHTLG
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