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Report for CCDS94698.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94698.1 Public Homo sapiens X PNCK 24 110 108 CCDS HistoryNCBI Gene:139728Re-query CCDS DB by CCDS ID:94698.1Re-query CCDS DB by GeneID:139728See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94698.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000340888.8 ENSP00000340586.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000340888.8Link to Ensembl Protein Viewer:ENSP00000340586.4Re-query CCDS DB by Nucleotide ID:ENST00000340888Re-query CCDS DB by Protein ID:ENSP00000340586
Original member Current member EBI ENST00000370150.5 ENSP00000359169.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000370150.5Link to Ensembl Protein Viewer:ENSP00000359169.1Re-query CCDS DB by Nucleotide ID:ENST00000370150Re-query CCDS DB by Protein ID:ENSP00000359169
Original member Current member NCBI NM_001366975.1 NP_001353904.1 Accepted alive Link to Nucleotide Sequence:NM_001366975.1Link to Protein Sequence:NP_001353904.1Re-query CCDS DB by Nucleotide ID:NM_001366975Re-query CCDS DB by Protein ID:NP_001353904Link to BLAST:NP_001353904.1
Original member Current member NCBI NM_001366976.1 NP_001353905.1 Accepted alive Link to Nucleotide Sequence:NM_001366976.1Link to Protein Sequence:NP_001353905.1Re-query CCDS DB by Nucleotide ID:NM_001366976Re-query CCDS DB by Protein ID:NP_001353905Link to BLAST:NP_001353905.1
Original member Current member NCBI NM_001366977.1 NP_001353906.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001366977.1Link to Protein Sequence:NP_001353906.1Re-query CCDS DB by Nucleotide ID:NM_001366977Re-query CCDS DB by Protein ID:NP_001353906Link to BLAST:NP_001353906.1
Original member Current member NCBI NM_001366978.1 NP_001353907.1 Accepted alive Link to Nucleotide Sequence:NM_001366978.1Link to Protein Sequence:NP_001353907.1Re-query CCDS DB by Nucleotide ID:NM_001366978Re-query CCDS DB by Protein ID:NP_001353907Link to BLAST:NP_001353907.1
Original member Current member NCBI NM_001366979.1 NP_001353908.1 Accepted alive Link to Nucleotide Sequence:NM_001366979.1Link to Protein Sequence:NP_001353908.1Re-query CCDS DB by Nucleotide ID:NM_001366979Re-query CCDS DB by Protein ID:NP_001353908Link to BLAST:NP_001353908.1
Original member Current member NCBI NM_001366980.1 NP_001353909.1 Accepted alive Link to Nucleotide Sequence:NM_001366980.1Link to Protein Sequence:NP_001353909.1Re-query CCDS DB by Nucleotide ID:NM_001366980Re-query CCDS DB by Protein ID:NP_001353909Link to BLAST:NP_001353909.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001353904.1 343 Q6P2M8-1 343 100% 0 0
NP_001353905.1 343 Q6P2M8-1 343 100% 0 0
NP_001353906.1 343 Q6P2M8-1 343 100% 0 0
NP_001353907.1 343 Q6P2M8-1 343 100% 0 0
NP_001353908.1 343 Q6P2M8-1 343 100% 0 0
NP_001353909.1 343 Q6P2M8-1 343 100% 0 0

Chromosomal Locations for CCDS 94698.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 153670457 153670594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153670744 153670831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153670918 153670996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153671078 153671190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153671285 153671360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153671549 153671672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153671880 153672018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153672126 153672200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153672566 153672697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153673009 153673076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1032 nt):
ATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGG
GTGCCTTCTCCGAGGTGGTGCTGGCCCAGGAGCGGGGCTCCGCACACCTCGTGGCCCTCAAGTGCATCCC
CAAGAAGGCCCTCCGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGTCAC
CCCAACATCGTCGCTCTGGAGGATGTCCACGAGAGCCCTTCCCACCTCTACCTGGCCATGGAACTGGTGA
CGGGTGGCGAGCTGTTTGACCGCATCATGGAGCGCGGCTCCTACACAGAGAAGGATGCCAGCCATCTGGT
GGGTCAGGTCCTTGGCGCCGTCTCCTACCTGCACAGCCTGGGGATCGTGCACCGGGACCTCAAGCCCGAA
AACCTCCTGTATGCCACGCCCTTTGAGGACTCGAAGATCATGGTCTCTGACTTTGGACTCTCCAAAATCC
AGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCCCTGGATATGTGGCCCCAGAGCTCTTGGAGCAGAA
ACCCTACGGGAAGGCCGTAGATGTGTGGGCCCTGGGCGTCATCTCCTACATCCTGCTGTGTGGGTACCCC
CCCTTCTACGACGAGAGCGACCCTGAGCTCTTCAGCCAGATCCTGAGGGCCAGCTATGAGTTTGACTCTC
CTTTCTGGGATGACATCTCAGAATCAGCCAAAGACTTCATCCGGCACCTTCTGGAGCGAGACCCCCAGAA
GAGGTTCACCTGCCAACAGGCCTTGCGGCACCTTTGGATCTCTGGGGACACAGCCTTCGACAGGGACATC
TTAGGCTCTGTCAGTGAGCAGATCCGGAAGAACTTTGCTCGGACACACTGGAAGCGAGCCTTCAATGCCA
CCTCGTTCCTGCGCCACATCCGGAAGCTGGGGCAGATCCCAGAGGGCGAGGGGGCCTCTGAGCAGGGCAT
GGCCCGCCACAGCCACTCAGGCCTCCGTGCTGGCCAGCCCCCCAAGTGGTGA

Translation (343 aa):
MLLLKKHTEDISSVYEIRERLGSGAFSEVVLAQERGSAHLVALKCIPKKALRGKEALVENEIAVLRRISH
PNIVALEDVHESPSHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLKPE
NLLYATPFEDSKIMVSDFGLSKIQAGNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVISYILLCGYP
PFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERDPQKRFTCQQALRHLWISGDTAFDRDI
LGSVSEQIRKNFARTHWKRAFNATSFLRHIRKLGQIPEGEGASEQGMARHSHSGLRAGQPPKW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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