CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS92431.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
92431.1 |
Public |
Homo sapiens |
18 |
MTCL1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:23255](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:92431.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:23255](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 18 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108
Review status: Reviewed (by RefSeq and Havana)
Attributes |
Inferred exon combination |
Sequence IDs included in CCDS 92431.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000695636.1 |
ENSP00000512073.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000695636.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000512073.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000695636](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000512073](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001395333.1 |
NP_001382262.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001395333.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001382262.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001395333](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001382262](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001382262.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 92431.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6036 nt): ATGGAGACACTGAACGGCCCCGCGGGCGGAGGTGCCCCGGACGCGAAGCTGCAGCCGCCCGGCCAGCACC ACCGCCACCACCACCTCCACCCGGTGGCCGAAAGGCGGCGGCTGCACCGTGCGCCCTCGCCCGCCAGACC CTTCCTCAAGGACCTGCACGCCCGGCCCGCCGCGCCCGGCCCGGCCGTCCCCTCCTCGGGCCGAGCCCCG GCTCCCGCCGCCCCGCGCTCGCCCAACCTCGCGGGCAAAGCGCCGCCCTCGCCGGGGTCCCTGGCCGCGC CCGGCCGCCTCTCTCGGCGCAGTGGCGGCGTCCCGGGCGCGAAGGACAAGCCCCCGCCGGGCGCCGGGGC CAGAGCGGCGGGCGGTGCCAAGGCTGCCCTGGGAAGCAGGAGGGCGGCGCGCGTGGCGCCCGCGGAGCCG CTGTCCCGGGCTGGGAAGCCTCCCGGAGCCGAGCCGCCGTCTGCCGCTGCCAAGGGCCGCAAAGCCAAGC GCGGCTCCCGGGCGCCACCCGCCCGCACCGTCGGCCCCCCGACCCCGGCCGCCCGGATCCCTGCCGTGAC CCTCGCGGTGACCTCGGTGGCCGGGTCCCCGGCCCGCTGCTCGCGCATCAGCCACACGGACAGCAGCTCC GACCTCTCTGACTGCCCCTCCGAACCCCTGTCCGACGAGCAGCGCCTGCTCCCTGCCGCCAGCAGCGACG CCGAATCCGGCACGGGCTCCAGCGACCGTGAACCCCCACGAGGAGCGCCGACGCCGAGCCCCGCAGCCCG AGGAGCGCCGCCGGGCAGCCCCGAGCCCCCAGCGCTCCTCGCCGCGCCCCTCGCCGCGGGCGCCTGTCCC GGGGGCCGGAGCATCCCGAGCGGGGTTTCGGGGGGTTTCGCGGGGCCCGGCGTGGCGGAGGATGTCCGGG GGCGCTCGCCACCGGAGCGACCAGTCCCCGGGACCCCCAAGGAGCCCAGCCTGGGCGAGCAGTCTCGGCT CGTGCCAGCGGCGGAGGAAGAAGAGCTGCTGCGGGAGATGGAGGAGCTGCGCTCGGAGAACGACTATCTC AAGGATGAGTTAGATGAACTCCGTGCTGAGATGGAAGAGATGAGAGACAGTTATTTAGAGGAAGATGTTT ACCAGCTGCAGGAACTTCGGCGAGAACTGGACCGCGCTAATAAAAACTGCCGAATCCTGCAGTACCGTCT TCGGAAAGCCGAGCAGAAAAGCCTGAAAGTGGCTGAGACGGGTCAGGTGGATGGTGAGCTTATTCGAAGC CTGGAGCAGGACTTGAAGGTAGCCAAAGATGTATCTGTCAGATTGCACCACGAACTTAAGACGGTGGAGG AAAAGCGCGCTAAAGCTGAGGATGAAAACGAAACTCTCCGACAGCAGATGATTGAAGTGGAAATATCCAA ACAGGCCCTCCAGAATGAGCTGGAGAGACTGAAAGAGAGTTCCCTAAAAAGAAGAAGCACTCGGGAAATG TACAAGGAGAAGAAAACCTTTAACCAGGATGACAGTGCCGATTTGAGGTGCCAGCTCCAGTTTGCCAAAG AGGAAGCCTTCCTGATGCGCAAAAAGATGGCCAAGCTAGGAAGGGAGAAGGACGAGCTGGAGCAGGAGCT CCAGAAGTACAAGTCCCTCTATGGGGATGTGGACAGTCCCCTGCCCACGGGGGAAGCAGGCGGGCCCCCC AGCACCCGGGAGGCCGAGCTGAAGCTGCGGCTAAAGCTGGTGGAGGAGGAAGCCAACATCTTGGGCCGGA AGATCGTGGAGCTGGAGGTGGAGAACCGTGGCCTCAAGGCAGAGATGGAGGACATGCGGGGCCAGCAGGA GCGGGAGGGCCCGGGTCGGGACCACGCACCCAGCATTCCTACCTCACCCTTCGGTGACTCCCTGGAGTCC TCCACTGAGCTCCGCCGCCACCTGCAGTTTGTAGAAGAGGAAGCGGAGTTGCTCCGGAGGTCCATCTCCG AGATCGAAGACCACAACCGGCAACTGACCCACGAGCTCAGCAAGTTTAAGTTTGAGCCTCCCCGGGAGCC GGGCTGGCTAGGAGAGGGTGCAAGTCCTGGTGCCGGGGGTGGGGCCCCCCTGCAGGAGGAGCTGAAGTCA GCCAGGCTGCAGATCAGCGAGCTCAGCGGCAAGGTGCTCAAACTGCAGCACGAGAACCACGCGCTGCTGT CCAACATCCAGCGCTGCGACCTGGCAGCCCACCTGGGGCTGCGTGCCCCCAGTCCCCGGGACAGCGATGC CGAGAGTGATGCGGGCAAGAAGGAGAGTGATGGGGAGGAGAGCCGCCTGCCCCAGCCCAAGCGGGAAGGG CCTGTTGGCGGGGAGAGTGACTCGGAGGAAATGTTTGAGAAGACGTCGGGCTTCGGGAGCGGGAAGCCAT CGGAGGCCAGCGAGCCATGCCCCACGGAGCTCCTGAAGGCCCGGGAGGACTCTGAGTACCTAGTGACCCT AAAACACGAGGCCCAGCGGCTAGAGCGGACGGTGGAGCGCCTCATCACGGACACCGACAGCTTCCTCCAT GATGCGGGGCTGCGGGGTGGTGCGCCCTTACCGGGGCCTGGCCTCCAGGGCGAAGAGGAGCAGGGTGAGG GGGACCAGCAGGAGCCCCAGCTGCTGGGGACCATCAACGCCAAGATGAAGGCTTTCAAGAAAGAGCTGCA GGCCTTCCTGGAGCAGGTGAACCGCATTGGGGATGGCCTATCCCCCTTGCCCCACCTCACAGAGTCCTCT AGCTTCCTCTCCACTGTGACTTCCGTGTCCCGGGACTCCCCCATCGGGAACCTGGGGAAGGAGCTGGGCC CAGACTTGCAGTCCAGACTGAAAGAGCAGCTGGAGTGGCAGCTCGGGCCGGCCCGAGGGGACGAGCGGGA GAGCCTGCGCCTCCGAGCCGCGCGGGAGCTGCACCGCCGCGCAGACGGGGACACCGGGAGCCACGGGCTG GGAGGCCAGACCTGCTTCAGCCTGGAGCTCAGGGGCCCCCCCGTTTTACCTGAGCAGAGTGTATCCATAG AGGAGCTACAGGGTCAGCTCGTGCAGGCGGCCAGACTGCATCAAGAGGAGACAGAGACATTTACAAACAA GATCCATAAGATGGAGGAGGAGCACCTCTATGCCTTGAGGTGGAAAGAACTGGAAATGCACAGCCTGGCT TTGCAAAACACCCTCCATGAGCGAACCTGGAGTGATGAGAAGAATCTGATGCAGCAGGAGCTCCGGTCCT TGAAGCAGAACATTTTCCTCTTCTACGTCAAACTCAGGTGGCTGCTGAAACACTGGCGGCAAGGGAAGCA GATGGAGGAGGAAGGAGAGGAGTTCACTGAGGGTGAACATCCAGAGACCCTCTCCAGGCTCGGGGAGCTT GGAGTCCAGGGGGGTCACCAGGCGGATGGCCCAGACCACGACAGTGACCGAGGCTGTGGCTTTCCAGTGG GGGAGCACTCCCCACACTCCCGGGTGCAGATTGGAGATCACAGCTTGCGGCTGCAGACCGCGGACAGGGG ACAGCCCCACAAACAGGTGGTGGAAAACCAGCAGCTGTTCAGCGCCTTCAAGGCCTTGCTGGAGGACTTC CGTGCGGAGCTGCGGGAGGATGAGCGTGCCCGACTACGGCTGCAGCAGCAATATGCCAGCGACAAGGCGG CCTGGGACGTGGAGTGGGCCGTGCTCAAGTGCCGTCTGGAACAGCTGGAAGAGAAGACTGAGAACAAGTT GGGAGAACTAGGCTCCTCCGCTGAGAGCAAGGGGGCCTTGAAGAAGGAGAGAGAGGTGCACCAGAAGCTC CTGGCAGACAGTCACAGCCTGGTCATGGACCTGCGCTGGCAGATCCATCACAGCGAGAAGAACTGGAACC GGGAGAAGGTGGAACTTCTCGACCGCCTGGACAGAGATCGGCAGGAGTGGGAGCGGCAGAAGAAGGAATT CTTGTGGAGGATAGAGCAGTTGCAGAAAGAGAACAGTCCCCGGAGAGGTGGCAGTTTCCTCTGTGATCAA AAAGACGGCAACGTTCGCCCCTTTCCCCACCAGGGAAGCCTCCGCATGCCCCGTCCAGTGGCCATGTGGC CTTGTGCAGATGCTGACTCCATCCCGTTTGAAGACCGGCCGCTGTCCAAGCTGAAGGAGTCGGACAGGTG CTCGGCCAGTGAGAATCTCTACCTGGATGCCTTGTCCCTGGATGACGAGCCAGAAGAGCCACCAGCCCAC AGGCCCGAGAGGGAGTTCAGGAACCGCCTCCCTGAGGAAGAAGAAAATCACAAAGGAAATCTTCAAAGGG CGGTGTCCGTGTCCTCCATGTCTGAGTTCCAGCGTCTAATGGACATCTCCCCCTTCCTGCCTGAGAAGGG CCTGCCGTCCACCAGCAGCAAGGAGGATGTCACCCCACCCCTGTCTCCAGACGACCTCAAGTACATCGAG GAGTTCAACAAGAGCTGGGACTACACACCCAACAGGGGCCACAATGGTGGGGGGCCGGACCTTTGGGCCG ACAGGACCGAGGTGGGGCGGGCAGGGCACGAGGACAGCACAGAGCCTTTCCCCGACTCCTCCTGGTACCT AACCACAAGTGTCACCATGACCACGGACACCATGACCAGCCCAGAGCACTGCCAGAAGCAGCCACTGCGG AGCCACGTCCTCACCGAGCAGTCGGGGTTGCGCGTGTTACACAGCCCGCCTGCCGTGCGCAGGGTCGACA GCATCACGGCGGCAGGTGGTGAGGGTCCCTTTCCCACAAGCAGAGCCAGAGGGAGCCCGGGAGACACCAA GGGAGGCCCTCCAGAACCCATGCTCAGCAGGTGGCCTTGCACCTCCCCCAGGCACTCCCGGGACTATGTG GAGGGGGCACGGCGCCCCCTTGATAGTCCCCTCTGTACCTCCCTGGGGTTTGCCTCCCCACTGCACAGCC TGGAGATGTCCAAGAACTTGAGTGATGACATGAAGGAGGTGGCCTTCTCTGTCAGGAATGCCATCTGCTC CGGCCCTGGCGAGCTGCAAGTCAAGGACATGGCCTGCCAGACCAATGGGTCCCGGACGATGGGGACCCAG ACTGTTCAGACCATCAGTGTGGGCTTGCAGACTGAAGCCCTGCGTGGCAGCGGTGTCACCAGCAGCCCCC ACAAGTGTCTCACTCCAAAGGCTGGGGGCGGTGCTACACCCGTGTCGTCTCCTTCCCGGAGCCTTAGGAG CAGACAGGTGGCCCCTGCCATCGAGAAGGTGCAGGCCAAGTTTGAACGCACATGCTGCTCCCCCAAGTAT GGTTCTCCCAAGCTGCAGAGGAAGCCCCTCCCCAAAGCCGACCAGCCAAATAACAGGACGTCACCAGGGA TGGCCCAGAAAGGGTACAGTGAGTCAGCCTGGGCCCGCTCCACCACCACAAGGGAGAGCCCCGTGCACAC CACCATTAATGATGGCCTCTCCAGCCTCTTCAACATCATTGACCACAGCCCCGTGGTGCAGGACCCCTTC CAGAAGGGGCTGCGGGCCGGCAGTCGGTCTCGCTCAGCAGAGCCCCGACCAGAGCTGGGCCCAGGCCAGG AAACAGGCACCAATTCCCGAGGAAGGTCGCCTAGCCCCATTGGGGTGGGGTCAGAGATGTGCAGGGAGGA AGGGGGAGAGGGCACGCCAGTGAAGCAGGACTTATCTGCTCCCCCTGGCTACACGCTCACTGAGAACGTG GCCCGGATCCTCAACAAGAAGCTGCTGGAACATGCCTTAAAGGAGGAGAGGAGGCAGGCTGCCCACGGGC CCCCGGGTCTCCACAGTGACAGCCACTCGCTGGGGGACACAGCCGAGCCAGGGCCCATGGAGGAACTACC TTGTTCTGCACTAGCTCCATCCCTAGAGCCCTGCTTCTCCAGGCCCGAGAGACCAGCAAACCGTCGCCCT CCGTCCCGTTGGGCCCCACATTCCCCCACTGCCTCACAGCCTCAGTCACCCGGAGACCCGACGTCCTTGG AGGAGCATGGTGGCGAGGAGCCGCCCGAGGAGCAGCCACACCGAGATGCAAGCTTGCATGGATTATCACA GTATAATTCACTGTAA
Translation (2011 aa): METLNGPAGGGAPDAKLQPPGQHHRHHHLHPVAERRRLHRAPSPARPFLKDLHARPAAPGPAVPSSGRAP APAAPRSPNLAGKAPPSPGSLAAPGRLSRRSGGVPGAKDKPPPGAGARAAGGAKAALGSRRAARVAPAEP LSRAGKPPGAEPPSAAAKGRKAKRGSRAPPARTVGPPTPAARIPAVTLAVTSVAGSPARCSRISHTDSSS DLSDCPSEPLSDEQRLLPAASSDAESGTGSSDREPPRGAPTPSPAARGAPPGSPEPPALLAAPLAAGACP GGRSIPSGVSGGFAGPGVAEDVRGRSPPERPVPGTPKEPSLGEQSRLVPAAEEEELLREMEELRSENDYL KDELDELRAEMEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRS LEQDLKVAKDVSVRLHHELKTVEEKRAKAEDENETLRQQMIEVEISKQALQNELERLKESSLKRRSTREM YKEKKTFNQDDSADLRCQLQFAKEEAFLMRKKMAKLGREKDELEQELQKYKSLYGDVDSPLPTGEAGGPP STREAELKLRLKLVEEEANILGRKIVELEVENRGLKAEMEDMRGQQEREGPGRDHAPSIPTSPFGDSLES STELRRHLQFVEEEAELLRRSISEIEDHNRQLTHELSKFKFEPPREPGWLGEGASPGAGGGAPLQEELKS ARLQISELSGKVLKLQHENHALLSNIQRCDLAAHLGLRAPSPRDSDAESDAGKKESDGEESRLPQPKREG PVGGESDSEEMFEKTSGFGSGKPSEASEPCPTELLKAREDSEYLVTLKHEAQRLERTVERLITDTDSFLH DAGLRGGAPLPGPGLQGEEEQGEGDQQEPQLLGTINAKMKAFKKELQAFLEQVNRIGDGLSPLPHLTESS SFLSTVTSVSRDSPIGNLGKELGPDLQSRLKEQLEWQLGPARGDERESLRLRAARELHRRADGDTGSHGL GGQTCFSLELRGPPVLPEQSVSIEELQGQLVQAARLHQEETETFTNKIHKMEEEHLYALRWKELEMHSLA LQNTLHERTWSDEKNLMQQELRSLKQNIFLFYVKLRWLLKHWRQGKQMEEEGEEFTEGEHPETLSRLGEL GVQGGHQADGPDHDSDRGCGFPVGEHSPHSRVQIGDHSLRLQTADRGQPHKQVVENQQLFSAFKALLEDF RAELREDERARLRLQQQYASDKAAWDVEWAVLKCRLEQLEEKTENKLGELGSSAESKGALKKEREVHQKL LADSHSLVMDLRWQIHHSEKNWNREKVELLDRLDRDRQEWERQKKEFLWRIEQLQKENSPRRGGSFLCDQ KDGNVRPFPHQGSLRMPRPVAMWPCADADSIPFEDRPLSKLKESDRCSASENLYLDALSLDDEPEEPPAH RPEREFRNRLPEEEENHKGNLQRAVSVSSMSEFQRLMDISPFLPEKGLPSTSSKEDVTPPLSPDDLKYIE EFNKSWDYTPNRGHNGGGPDLWADRTEVGRAGHEDSTEPFPDSSWYLTTSVTMTTDTMTSPEHCQKQPLR SHVLTEQSGLRVLHSPPAVRRVDSITAAGGEGPFPTSRARGSPGDTKGGPPEPMLSRWPCTSPRHSRDYV EGARRPLDSPLCTSLGFASPLHSLEMSKNLSDDMKEVAFSVRNAICSGPGELQVKDMACQTNGSRTMGTQ TVQTISVGLQTEALRGSGVTSSPHKCLTPKAGGGATPVSSPSRSLRSRQVAPAIEKVQAKFERTCCSPKY GSPKLQRKPLPKADQPNNRTSPGMAQKGYSESAWARSTTTRESPVHTTINDGLSSLFNIIDHSPVVQDPF QKGLRAGSRSRSAEPRPELGPGQETGTNSRGRSPSPIGVGSEMCREEGGEGTPVKQDLSAPPGYTLTENV ARILNKKLLEHALKEERRQAAHGPPGLHSDSHSLGDTAEPGPMEELPCSALAPSLEPCFSRPERPANRRP PSRWAPHSPTASQPQSPGDPTSLEEHGGEEPPEEQPHRDASLHGLSQYNSL
|