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Report for CCDS53677.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53677.1 Public Homo sapiens 11 KRTAP5-9 24 110 108 CCDS HistoryNCBI Gene:3846Re-query CCDS DB by CCDS ID:53677.1Re-query CCDS DB by GeneID:3846See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 53677.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000528743.4 ENSP00000431443.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000528743.4Link to Ensembl Protein Viewer:ENSP00000431443.3Re-query CCDS DB by Nucleotide ID:ENST00000528743Re-query CCDS DB by Protein ID:ENSP00000431443
Original member Current member NCBI NM_005553.4 NP_005544.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005553.4Link to Protein Sequence:NP_005544.4Re-query CCDS DB by Nucleotide ID:NM_005553Re-query CCDS DB by Protein ID:NP_005544Link to BLAST:NP_005544.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005544.4 169 P26371 169 100% 0 0

Chromosomal Locations for CCDS 53677.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 71548658 71549167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (510 nt):
ATGGGCTGCTGTGGCTGCTCCGGAGGCTGTGGCTCCAGCTGTGGAGGCTGTGACTCCAGCTGTGGGAGCT
GTGGCTCTGGCTGCAGGGGCTGTGGCCCCAGCTGCTGTGCACCCGTCTACTGCTGCAAGCCCGTGTGCTG
CTGTGTTCCAGCCTGTTCCTGCTCTAGCTGTGGCAAGCGGGGCTGTGGCTCCTGTGGGGGCTCCAAGGGA
GGCTGTGGTTCTTGTGGCTGCTCCCAGTGCAGTTGCTGCAAGCCCTGCTGTTGCTCTTCAGGCTGTGGGT
CATCCTGCTGCCAGTGCAGCTGCTGCAAGCCCTACTGCTCCCAGTGCAGCTGCTGTAAGCCCTGTTGCTC
CTCCTCGGGTCGTGGGTCATCCTGCTGCCAATCCAGCTGCTGCAAGCCCTGCTGCTCATCCTCAGGCTGT
GGGTCATCCTGCTGCCAGTCCAGCTGCTGCAAGCCCTGCTGCTCCCAGTCCAGATGCTGTGTCCCTGTGT
GCTACCAGTGCAAGATCTGA

Translation (169 aa):
MGCCGCSGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSSCGKRGCGSCGGSKG
GCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSSCCQSSCCKPCCSSSGC
GSSCCQSSCCKPCCSQSRCCVPVCYQCKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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