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Report for CCDS42840.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42840.1 Public Homo sapiens 2 MAB21L4 24 110 108 CCDS HistoryNCBI Gene:79919Re-query CCDS DB by CCDS ID:42840.1Re-query CCDS DB by GeneID:79919See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42840.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000402775.6 ENSP00000385338.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402775.6Link to Ensembl Protein Viewer:ENSP00000385338.2Re-query CCDS DB by Nucleotide ID:ENST00000402775Re-query CCDS DB by Protein ID:ENSP00000385338
Original member Current member NCBI NM_024861.4 NP_079137.4 Accepted alive Link to Nucleotide Sequence:NM_024861.4Link to Protein Sequence:NP_079137.4Re-query CCDS DB by Nucleotide ID:NM_024861Re-query CCDS DB by Protein ID:NP_079137Link to BLAST:NP_079137.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079137.4 279 Q08AI8-3 279 100% 0 0

Chromosomal Locations for CCDS 42840.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 240887070 240887162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 240888292 240888648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 240890005 240890158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 240891538 240891763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 240891930 240891939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (840 nt):
ATGGACACAGGTTCGCTGAACGCGGCCAGCCTGAGGGAGGAGCAGCTCCACCTGTCCTTGCTGGTGTCCA
GCGGCTGGAGAACAATCAGCTTCCACGTGGTGCCCGTGGTGAGAAGGAAGCTTGGGGCGCCTGCCCTGGA
GGGGGTGCAGCAGATGCCCGGATTCCCTGAGGGCAGCTTGAGAAGGATCCTCAGCCAAGGGGTGGACCTG
GTGCCGGCCAGCGCCCAGCTCTGGAGGACCTCCACTGACTACCTGCTCACGAGGCTGCTGGGGGAGCTGG
GCTCCCTGCAGGGTCATCGCCTGGACAGCCTCTCCATCCTCGACCGGGTCAACCACGAGAGCTGGCGTGA
CAGTGGCCAGACTGACGGCCTGACCTTTGGCCACCTGAAGATGGTGCTGCTGTGGGCCTCTGTGCTCTTC
CTGGCGCCCGAGGACTGGGCAGAACTGCAGGGCGCCGTGTACCGCCTGCTGGTGGTGCTGCTCTGTTGCC
TGGCCACGCGGAAGCTGCCCCACTTCCTCCACCCGCAGCGCAACCTGCTGCAGGGCAGCGGCCTGGACCT
TGGTGCCATCTACCAGCGCGTGGAGGGCTTCGCCAGCCAGCCCGAGGCGGCCCTGCGCATCCACGCCACC
CACCTGGGCCGCAGCCCCCCGCCGCGCATCGGCTCCGGGCTCAAGGCGCTCCTGCAGCTGCCAGCCAGTG
ACCCCACTTACTGGGCCACTGCCTACTTCGACGTCCTGCTGGACAAGTTCCAGGTCTTCAACATCCAGGA
TAAGGACCGGATCTCTGCCATGCAGAGCATCTTCCAGAAGACCAGGACTCTGGGAGGCGAGGAGAGCTGA

Translation (279 aa):
MDTGSLNAASLREEQLHLSLLVSSGWRTISFHVVPVVRRKLGAPALEGVQQMPGFPEGSLRRILSQGVDL
VPASAQLWRTSTDYLLTRLLGELGSLQGHRLDSLSILDRVNHESWRDSGQTDGLTFGHLKMVLLWASVLF
LAPEDWAELQGAVYRLLVVLLCCLATRKLPHFLHPQRNLLQGSGLDLGAIYQRVEGFASQPEAALRIHAT
HLGRSPPPRIGSGLKALLQLPASDPTYWATAYFDVLLDKFQVFNIQDKDRISAMQSIFQKTRTLGGEES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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