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Report for CCDS1445.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1445.1 Public Homo sapiens 1 PPP1R15B 24 110 108 CCDS HistoryNCBI Gene:84919Re-query CCDS DB by CCDS ID:1445.1Re-query CCDS DB by GeneID:84919See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1445.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367188.5 ENSP00000356156.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367188.5Link to Ensembl Protein Viewer:ENSP00000356156.4Re-query CCDS DB by Nucleotide ID:ENST00000367188Re-query CCDS DB by Protein ID:ENSP00000356156
Original member Current member NCBI NM_032833.5 NP_116222.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032833.5Link to Protein Sequence:NP_116222.4Re-query CCDS DB by Nucleotide ID:NM_032833Re-query CCDS DB by Protein ID:NP_116222Link to BLAST:NP_116222.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116222.4 713 Q5SWA1 713 100% 0 0

Chromosomal Locations for CCDS 1445.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 204406092 204406313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 204409492 204411411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2142 nt):
ATGGAGCCGGGGACAGGCGGATCGCGGAAACGGCTTGGCCCTCGGGCGGGCTTCCGGTTCTGGCCACCCT
TT
TTCCCTCGGCGATCGCAAGCAGGCTCTTCTAAGTTCCCGACGCCTCTTGGCCCGGAAAACTCCGGGAA
C
CCCACACTGCTTTCCTCTGCCCAGCCCGAGACTCGGGTCAGTTACTGGACGAAACTGCTCTCCCAGCTC
CTT
GCGCCGCTCCCCGGATTGCTTCAGAAGGTGCTAATTTGGAGCCAACTTTTCGGTGGAATGTTTCCGA
CC
AGATGGCTAGATTTTGCTGGAGTCTACAGCGCCCTGAGAGCCCTGAAGGGACGGGAGAAACCAGCCGC
C
CCCACAGCGCAGAAATCTTTGAGTTCGCTGCAGCTCGACTCCTCAGACCCCTCGGTCACCAGTCCCCTT
GAT
TGGCTAGAGGAGGGGATCCACTGGCAATACTCGCCCCCAGACCTAAAATTGGAGCTTAAGGCCAAGG
GA
AGTGCTTTGGACCCTGCAGCACAGGCTTTTCTCTTAGAGCAGCAGCTGTGGGGAGTGGAGCTGTTGCC
C
AGTAGCCTTCAATCCCGTCTGTACTCTAACCGGGAACTTGGCTCTTCGCCCTCTGGGCCTCTAAACATT
CAA
CGCATAGACAATTTCAGTGTGGTATCCTATTTGCTGAACCCTTCCTACCTGGACTGCTTTCCTAGGC
TA
GAAGTCAGCTATCAGAACAGTGATGGAAATAGCGAGGTAGTCGGCTTCCAGACACTAACCCCAGAGAG
C
AGCTGCCTGAGAGAGGACCATTGTCATCCCCAGCCGCTGAGTGCAGAACTCATTCCGGCCTCGTGGCAG
GGA
TGTCCACCTCTTTCTACGGAAGGCCTACCAGAAATTCACCATCTTCGCATGAAACGGCTGGAATTCC
TT
CAACAGGCTAGCAAGGGGCAAGATTTACCCACCCCTGACCAGGATAATGGCTACCACAGCCTGGAGGA
G
GAACACAGCCTTCTCCGGATGGATCCAAAACACTGCAGAGATAACCCAACACAGTTTGTTCCTGCTGCT
GGA
GACATTCCTGGAAACACCCAGGAATCCACTGAAGAAAAAATAGAATTATTAACTACAGAGGTTCCAC
TT
GCTTTGGAAGAAGAGAGCCCTTCTGAGGGCTGTCCATCTAGTGAGATACCTATGGAAAAGGAGCCTGG
A
GAGGGCCGAATAAGTGTAGTTGATTACTCATACCTAGAAGGTGACCTTCCCATTTCTGCCAGACCAGCT
TGT
AGTAACAAACTGATAGATTATATTTTGGGAGGTGCATCCAGTGACCTGGAAACAAGTTCTGATCCAG
AA
GGTGAGGATTGGGATGAGGAAGCTGAGGATGATGGTTTTGATAGTGATAGCTCACTGTCAGACTCAGA
C
CTTGAACAAGACCCTGAAGGGCTTCACCTTTGGAACTCTTTCTGCAGTGTAGATCCTTATAATCCCCAG
AAC
TTTACAGCAACAATTCAGACTGCTGCCAGAATTGTTCCTGAAGAGCCTTCTGATTCAGAGAAGGATT
TG
TCTGGCAAGTCTGATCTAGAGAATTCCTCCCAGTCTGGAAGCCTTCCTGAGACCCCTGAGCATAGTTC
T
GGGGAGGAAGATGACTGGGAATCTAGTGCAGATGAAGCAGAGAGTCTCAAACTGTGGAACTCATTCTGT
AAT
TCTGATGACCCCTACAACCCTTTAAATTTTAAGGCTCCTTTTCAAACATCAGGGGAAAATGAGAAAG
GC
TGTCGTGACTCAAAGACCCCATCTGAGTCCATTGTGGCCATTTCTGAGTGTCACACCTTACTTTCTTG
T
AAGGTGCAGCTGTTGGGGAGCCAAGAAAGTGAATGTCCAGACTCGGTACAGCGTGACGTTCTTTCTGGA
GGA
AGACACACACATGTCAAAAGAAAAAAGGTAACCTTCCTTGAAGAAGTTACTGAGTATTATATAAGTG
GT
GATGAGGATCGCAAAGGACCATGGGAAGAATTTGCAAGGGATGGATGCAGGTTCCAGAAACGAATTCA
A
GAAACAGAAGATGCTATTGGATATTGCTTGACATTTGAACACAGAGAAAGAATGTTTAATAGACTCCAG
GGA
ACATGCTTCAAAGGACTTAATGTTCTCAAGCAATGTTGA


Translation (713 aa):
MEPGTGGSRKRLGPRAGFRFWPPFFPRRSQAGSSKFPTPLGPENSGNPTLLSSAQPETRVSYWTKLLSQL
L
APLPGLLQKVLIWSQLFGGMFPTRWLDFAGVYSALRALKGREKPAAPTAQKSLSSLQLDSSDPSVTSPL
D
WLEEGIHWQYSPPDLKLELKAKGSALDPAAQAFLLEQQLWGVELLPSSLQSRLYSNRELGSSPSGPLNI
Q
RIDNFSVVSYLLNPSYLDCFPRLEVSYQNSDGNSEVVGFQTLTPESSCLREDHCHPQPLSAELIPASWQ
G
CPPLSTEGLPEIHHLRMKRLEFLQQASKGQDLPTPDQDNGYHSLEEEHSLLRMDPKHCRDNPTQFVPAA
G
DIPGNTQESTEEKIELLTTEVPLALEEESPSEGCPSSEIPMEKEPGEGRISVVDYSYLEGDLPISARPA
C
SNKLIDYILGGASSDLETSSDPEGEDWDEEAEDDGFDSDSSLSDSDLEQDPEGLHLWNSFCSVDPYNPQ
N
FTATIQTAARIVPEEPSDSEKDLSGKSDLENSSQSGSLPETPEHSSGEEDDWESSADEAESLKLWNSFC
N
SDDPYNPLNFKAPFQTSGENEKGCRDSKTPSESIVAISECHTLLSCKVQLLGSQESECPDSVQRDVLSG
G
RHTHVKRKK
VTFLEEVTEYYISGDEDRKGPWEEFARDGCRFQKRIQETEDAIGYCLTFEHRERMFNRLQ
G
TCFKGLNVLKQC




Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser