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Report for CCDS47605.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47605.1 Public Homo sapiens 7 MLXIPL 24 110 108 CCDS HistoryNCBI Gene:51085Re-query CCDS DB by CCDS ID:47605.1Re-query CCDS DB by GeneID:51085See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47605.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000429400.6 ENSP00000406296.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000429400.6Link to Ensembl Protein Viewer:ENSP00000406296.2Re-query CCDS DB by Nucleotide ID:ENST00000429400Re-query CCDS DB by Protein ID:ENSP00000406296
Original member Current member NCBI NM_032952.3 NP_116570.1 Accepted alive Link to Nucleotide Sequence:NM_032952.3Link to Protein Sequence:NP_116570.1Re-query CCDS DB by Nucleotide ID:NM_032952Re-query CCDS DB by Protein ID:NP_116570Link to BLAST:NP_116570.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116570.1 833 Q9NP71-2 833 100% 0 0

Chromosomal Locations for CCDS 47605.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 73593865 73593983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73594274 73594403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73595637 73595760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73595842 73595912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73596153 73596272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73596364 73596479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73596639 73596789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73596865 73596932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73597182 73597713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73599526 73599695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73605688 73605768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73605910 73606111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73606974 73607018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73607331 73607420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73607590 73607672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73616071 73616177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73624200 73624492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2502 nt):
ATGGCCGGCGCGCTGGCAGGTCTGGCCGCGGGCTTGCAGGTCCCGCGGGTCGCGCCCAGCCCAGACTCGG
ACTCGGACACAGACTCGGAGGACCCGAGTCTCCGGCGCAGCGCGGGCGGCTTGCTCCGCTCGCAGGTCAT
CCACAGCGGTCACTTCATGGTGTCGTCGCCGCACAGCGACTCGCTGCCCCGGCGGCGCGACCAGGAGGGG
TCCGTGGGGCCCTCCGACTTCGGGCCGCGCAGTATCGACCCCACACTCACACGCCTCTTCGAGTGCTTGA
GCCTGGCCTACAGTGGCAAGCTGGTGTCTCCCAAGTGGAAGAATTTCAAAGGCCTCAAGCTGCTCTGCAG
AGACAAGATCCGCCTGAACAACGCCATCTGGAGGGCCTGGTATATCCAGTATGTGAAGCGGAGGAAGAGC
CCCGTGTGTGGCTTCGTGACCCCCCTGCAGGGGCCTGAGGCTGATGCGCACCGGAAGCCGGAGGCCGTGG
TCCTGGAGGGGAACTACTGGAAGCGGCGCATCGAGGTGGTGATGCGGGAATACCACAAGTGGCGCATCTA
CTACAAGAAGCGGCTCCGTAAGCCCAGCAGGGAAGATGACCTCCTGGCCCCTAAGCAGGCGGAAGGCAGG
TGGCCGCCGCCGGAGCAATGGTGCAAACAGCTCTTCTCCAGTGTGGTCCCCGTGCTGCTGGGGGACCCAG
AGGAGGAGCCGGGTGGGCGGCAGCTCCTGGACCTCAATTGCTTTTTGTCCGACATCTCAGACACTCTCTT
CACCATGACTCAGTCCGGCCCTTCGCCCCTGCAGCTGCCGCCTGAGGATGCCTACGTCGGCAATGCTGAC
ATGATCCAGCCGGACCTGACGCCACTGCAGCCAAGCCTGGATGACTTCATGGACATCTCAGATTTCTTTA
CCAACTCCCGCCTCCCACAGCCGCCCATGCCTTCAAACTTCCCAGAGCCCCCCAGCTTCAGCCCCGTGGT
TGACTCCCTCTTCAGCAGTGGGACCCTGGGCCCAGAGGTGCCCCCGGCTTCCTCGGCCATGACCCACCTC
TCTGGACACAGCCGTCTGCAGGCTCGGAACAGCTGCCCTGGCCCCTTGGACTCCAGCGCCTTCCTGAGTT
CTGATTTCCTCCTTCCTGAAGACCCCAAGCCCCGGCTCCCACCCCCTCCTGTACCCCCACCTCTGCTGCA
TTACCCTCCCCCTGCCAAGGTGCCAGGCCTGGAGCCCTGCCCCCCACCTCCCTTCCCTCCCATGGCACCA
CCCACTGCTTTGCTGCAGGAAGAGCCTCTCTTCTCTCCCAGGTTTCCCTTCCCCACCGTCCCTCCTGCCC
CAGGAGTGTCTCCGCTGCCTGCTCCTGCAGCCTTCCCACCCACCCCACAGTCTGTCCCCAGCCCAGCCCC
CACCCCCTTCCCCATAGAGCTTCTACCCTTGGGGTATTCGGAGCCTGCCTTTGGGCCTTGCTTCTCCATG
CCCAGAGGCAAGCCCCCCGCCCCATCCCCTAGGGGACAGAAAGCCAGCCCCCCTACCTTAGCCCCTGCCA
CTGCCAGTCCCCCCACCACTGCGGGGAGCAACAACCCCTGCCTCACACAGCTGCTCACAGCAGCTAAGCC
GGAGCAAGCCCTGGAGCCACCACTTGTATCCAGCACCCTCCTCCGGTCCCCAGGGTCCCCGCAGGAGACA
GTCCCTGAATTCCCCTGCACATTCCTTCCCCCGACCCCGGCCCCTACACCGCCCCGGCCACCTCCAGGCC
CGGCCACATTGGCCCCTTCCAGGCCCCTGCTTGTCCCCAAAGCGGAGCGGCTCTCACCCCCAGCGCCCAG
CGGCAGTGAACGGCGGCTGTCAGGGGACCTCAGCTCCATGCCAGGCCCTGGGACTCTGAGCGTCCGTGTC
TCTCCCCCGCAACCCATCCTCAGCCGGGGCCGTCCAGACAGCAACAAGACCGAGAACCGGCGTATCACAC
ACATCTCCGCGGAGCAGAAGCGGCGCTTCAACATCAAGCTGGGGTTTGACACCCTTCATGGGCTCGTGAG
CACACTCAGTGCCCAGCCCAGCCTCAAGGAGCGTGCGGGCTTGCAGGAGGAGGCCCAGCAGCTGCGGGAT
GAGATTGAGGAGCTCAATGCCGCCATTAACCTGTGCCAGCAGCAGCTGCCCGCCACAGGGGTACCCATCA
CACACCAGCGTTTTGACCAGATGCGAGACATGTTTGATGACTACGTCCGAACCCGTACGCTGCACAACTG
GAAGTTCTGGGTGTTCAGCATCCTCATCCGGCCTCTGTTTGAGTCCTTCAACGGGATGGTGTCCACGGCA
AGTGTGCACACCCTCCGCCAGACCTCACTGGCCTGGCTGGACCAGTACTGCTCTCTGCCCGCTCTCCGGC
CAACTGTCCTGAACTCCCTACGCCAGCTGGGCACATCTACCAGTATCCTGACCGACCCGGGCCGCATCCC
TGAGCAAGCCACACGGGCAGTCACAGAGGGCACCCTTGGCAAACCTTTATAG

Translation (833 aa):
MAGALAGLAAGLQVPRVAPSPDSDSDTDSEDPSLRRSAGGLLRSQVIHSGHFMVSSPHSDSLPRRRDQEG
SVGPSDFGPRSIDPTLTRLFECLSLAYSGKLVSPKWKNFKGLKLLCRDKIRLNNAIWRAWYIQYVKRRKS
PVCGFVTPLQGPEADAHRKPEAVVLEGNYWKRRIEVVMREYHKWRIYYKKRLRKPSREDDLLAPKQAEGR
WPPPEQWCKQLFSSVVPVLLGDPEEEPGGRQLLDLNCFLSDISDTLFTMTQSGPSPLQLPPEDAYVGNAD
MIQPDLTPLQPSLDDFMDISDFFTNSRLPQPPMPSNFPEPPSFSPVVDSLFSSGTLGPEVPPASSAMTHL
SGHSRLQARNSCPGPLDSSAFLSSDFLLPEDPKPRLPPPPVPPPLLHYPPPAKVPGLEPCPPPPFPPMAP
PTALLQEEPLFSPRFPFPTVPPAPGVSPLPAPAAFPPTPQSVPSPAPTPFPIELLPLGYSEPAFGPCFSM
PRGKPPAPSPRGQKASPPTLAPATASPPTTAGSNNPCLTQLLTAAKPEQALEPPLVSSTLLRSPGSPQET
VPEFPCTFLPPTPAPTPPRPPPGPATLAPSRPLLVPKAERLSPPAPSGSERRLSGDLSSMPGPGTLSVRV
SPPQPILSRGRPDSNKTENRRITHISAEQKRRFNIKLGFDTLHGLVSTLSAQPSLKERAGLQEEAQQLRD
EIEELNAAINLCQQQLPATGVPITHQRFDQMRDMFDDYVRTRTLHNWKFWVFSILIRPLFESFNGMVSTA
SVHTLRQTSLAWLDQYCSLPALRPTVLNSLRQLGTSTSILTDPGRIPEQATRAVTEGTLGKPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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