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Report for CCDS4449.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4449.1 Public Homo sapiens 5 MGAT4B 24 110 108 CCDS HistoryNCBI Gene:11282Re-query CCDS DB by CCDS ID:4449.1Re-query CCDS DB by GeneID:11282See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4449.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337755.9 ENSP00000338487.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000337755.9Link to Ensembl Protein Viewer:ENSP00000338487.5Re-query CCDS DB by Nucleotide ID:ENST00000337755Re-query CCDS DB by Protein ID:ENSP00000338487
Original member Current member NCBI NM_054013.3 NP_463459.1 Accepted alive Link to Nucleotide Sequence:NM_054013.3Link to Protein Sequence:NP_463459.1Re-query CCDS DB by Nucleotide ID:NM_054013Re-query CCDS DB by Protein ID:NP_463459Link to BLAST:NP_463459.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_463459.1 563 Q9UQ53-3 563 100% 0 0

Chromosomal Locations for CCDS 4449.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 179798045 179798068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179798165 179798277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179798347 179798434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179798513 179798591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179798928 179799121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179799203 179799310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179799506 179799636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179799954 179800068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179800184 179800259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179800484 179800597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179800907 179800953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179801334 179801467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179801554 179801694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 179801784 179802111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1692 nt):
ATGTCACGTGTGGCAGGCACAAGAACAGATGTCAATGAGCTATTGCAGAGGTGGACACCCAGATGTGTGC
GCTGGCACACTGGAGGGGCCCGTAGGGTGGCTCTAGACCGCCCCCTCGTGACGGCTTGCCTACCACCTGC
AGGCGACGTTGTGGACGTTTACCAGCGGGAGTTCCTGGCGCTGCGCGATCGGTTGCACGCAGCTGAGCAG
GAGAGCCTCAAGCGCTCCAAGGAGCTCAACCTGGTGCTGGACGAGATCAAGAGGGCCGTGTCAGAAAGGC
AGGCGCTGCGAGACGGAGACGGCAATCGCACCTGGGGCCGCCTAACAGAGGACCCCCGATTGAAGCCGTG
GAACGGCTCACACCGGCACGTGCTGCACCTGCCCACCGTCTTCCATCACCTGCCACACCTGCTGGCCAAG
GAGAGCAGTCTGCAGCCCGCGGTGCGCGTGGGCCAGGGCCGCACCGGAGTGTCGGTGGTGATGGGCATCC
CGAGCGTGCGGCGCGAGGTGCACTCGTACCTGACTGACACTCTGCACTCGCTCATCTCCGAGCTGAGCCC
GCAGGAGAAGGAGGACTCGGTCATCGTGGTGCTGATCGCCGAGACTGACTCACAGTACACTTCGGCAGTG
ACAGAGAACATCAAGGCCTTGTTCCCCACGGAGATCCATTCTGGGCTCCTGGAGGTCATCTCACCCTCCC
CCCACTTCTACCCTGACTTCTCCCGCCTCCGAGAGTCCTTTGGGGACCCCAAGGAGAGAGTCAGGTGGAG
GACCAAACAGAACCTCGATTACTGCTTCCTCATGATGTACGCGCAGTCCAAAGGCATCTACTACGTGCAG
CTGGAGGATGACATCGTGGCCAAGCCCAACTACCTGAGCACCATGAAGAACTTTGCACTGCAGCAGCCTT
CAGAGGACTGGATGATCCTGGAGTTCTCCCAGCTGGGCTTCATTGGTAAGATGTTCAAGTCGCTGGACCT
GAGCCTGATTGTAGAGTTCATTCTCATGTTCTACCGGGACAAGCCCATCGACTGGCTCCTGGACCATATT
CTGTGGGTGAAAGTCTGCAACCCCGAGAAGGATGCGAAGCACTGTGACCGGCAGAAAGCCAACCTGCGGA
TCCGCTTCAAACCGTCCCTCTTCCAGCACGTGGGCACTCACTCCTCGCTGGCTGGCAAGATCCAGAAACT
GAAGGACAAAGACTTTGGAAAGCAGGCGCTGCGGAAGGAGCATGTGAACCCGCCAGCAGAGGTGAGCACG
AGCCTGAAGACATACCAGCACTTCACCCTGGAGAAAGCCTACCTGCGCGAGGACTTCTTCTGGGCCTTCA
CCCCTGCCGCGGGGGACTTCATCCGCTTCCGCTTCTTCCAACCTCTAAGACTGGAGCGGTTCTTCTTCCG
CAGTGGGAACATCGAGCACCCGGAGGACAAGCTCTTCAACACGTCTGTGGAGGTGCTGCCCTTCGACAAC
CCTCAGTCAGACAAGGAGGCCCTGCAGGAGGGCCGCACCGCCACCCTCCGGTACCCTCGGAGCCCCGACG
GCTACCTCCAGATCGGCTCCTTCTACAAGGGAGTGGCAGAGGGAGAGGTGGACCCAGCCTTCGGCCCTCT
GGAAGCACTGCGCCTCTCGATCCAGACGGACTCCCCTGTGTGGGTGATTCTGAGCGAGATCTTCCTGAAA
AAGGCCGACTAA

Translation (563 aa):
MSRVAGTRTDVNELLQRWTPRCVRWHTGGARRVALDRPLVTACLPPAGDVVDVYQREFLALRDRLHAAEQ
ESLKRSKELNLVLDEIKRAVSERQALRDGDGNRTWGRLTEDPRLKPWNGSHRHVLHLPTVFHHLPHLLAK
ESSLQPAVRVGQGRTGVSVVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAV
TENIKALFPTEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYYVQ
LEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFYRDKPIDWLLDHI
LWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKDKDFGKQALRKEHVNPPAEVST
SLKTYQHFTLEKAYLREDFFWAFTPAAGDFIRFRFFQPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDN
PQSDKEALQEGRTATLRYPRSPDGYLQIGSFYKGVAEGEVDPAFGPLEALRLSIQTDSPVWVILSEIFLK
KAD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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