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Report for CCDS31065.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31065.1 Public Homo sapiens 1 EDARADD 24 110 108 CCDS HistoryNCBI Gene:128178Re-query CCDS DB by CCDS ID:31065.1Re-query CCDS DB by GeneID:128178See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31065.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359362.6 ENSP00000352320.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359362.6Link to Ensembl Protein Viewer:ENSP00000352320.4Re-query CCDS DB by Nucleotide ID:ENST00000359362Re-query CCDS DB by Protein ID:ENSP00000352320
Original member NCBI NM_080738.4 NP_542776.1 Updated not alive Link to Nucleotide Sequence:NM_080738.4Link to Protein Sequence:NP_542776.1Re-query CCDS DB by Nucleotide ID:NM_080738Re-query CCDS DB by Protein ID:NP_542776
Current member NCBI NM_080738.5 NP_542776.1 Accepted alive Link to Nucleotide Sequence:NM_080738.5Link to Protein Sequence:NP_542776.1Re-query CCDS DB by Nucleotide ID:NM_080738Re-query CCDS DB by Protein ID:NP_542776Link to BLAST:NP_542776.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_542776.1 205 Q8WWZ3-2 205 100% 0 0

Chromosomal Locations for CCDS 31065.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 236395630 236395660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 236409216 236409274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 236414260 236414299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 236427392 236427450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 236468231 236468276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 236482267 236482649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (618 nt):
ATGGCTTCACCGGACGACCCTCTGCGCGCAGATCATATGGTAAAGGAACCAGTGGAAGACACAGACCCTA
GCACTTTATCCTTTAATATGTCAGACAAATATCCCATTCAAGATACGGAACTCCCTAAAGCTGAAGAATG
TGATACAATTACTTTGAACTGCCCACGAAATTCAGATATGAAAAATCAGGGAGAAGAAAATGGCTTTCCA
GATAGCACTGGAGATCCTCTTCCAGAGATCAGCAAGGACAACTCCTGCAAAGAAAACTGTACTTGTTCCT
CCTGCTTGCTCCGGGCCCCCACCATAAGTGACTTGCTCAATGATCAGGACTTACTAGACGTGATCAGGAT
AAAGCTGGATCCGTGTCACCCAACGGTGAAAAACTGGAGGAATTTTGCAAGCAAATGGGGGATGTCCTAT
GACGAATTGTGCTTCCTGGAGCAGAGGCCACAGAGCCCCACCTTGGAGTTCTTGCTCCGGAACAGTCAGA
GGACGGTGGGCCAGCTGATGGAGCTCTGCAGGCTCTACCACAGGGCCGACGTGGAGAAGGTTCTGCGCAG
GTGGGTGGACGAGGAGTGGCCCAAGCGGGAGCGTGGAGACCCCTCCAGGCACTTCTAG

Translation (205 aa):
MASPDDPLRADHMVKEPVEDTDPSTLSFNMSDKYPIQDTELPKAEECDTITLNCPRNSDMKNQGEENGFP
DSTGDPLPEISKDNSCKENCTCSSCLLRAPTISDLLNDQDLLDVIRIKLDPCHPTVKNWRNFASKWGMSY
DELCFLEQRPQSPTLEFLLRNSQRTVGQLMELCRLYHRADVEKVLRRWVDEEWPKRERGDPSRHF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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