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Report for CCDS38318.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38318.1 Public Mus musculus 2 Wfdc12 23 108 98 CCDS HistoryNCBI Gene:192200Re-query CCDS DB by CCDS ID:38318.1Re-query CCDS DB by GeneID:192200See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38318.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051272.7 ENSMUSP00000050836.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051272.7Link to Ensembl Protein Viewer:ENSMUSP00000050836.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000051272Re-query CCDS DB by Protein ID:ENSMUSP00000050836
Original member NCBI NM_138684.2 NP_619625.1 Updated not alive Link to Nucleotide Sequence:NM_138684.2Link to Protein Sequence:NP_619625.1Re-query CCDS DB by Nucleotide ID:NM_138684Re-query CCDS DB by Protein ID:NP_619625
Current member NCBI NM_138684.3 NP_619625.1 Accepted alive Link to Nucleotide Sequence:NM_138684.3Link to Protein Sequence:NP_619625.1Re-query CCDS DB by Nucleotide ID:NM_138684Re-query CCDS DB by Protein ID:NP_619625Link to BLAST:NP_619625.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_619625.1 85 Q9JHY3 85 100% 0 0

Chromosomal Locations for CCDS 38318.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 164189659 164189683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164190136 164190286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164190438 164190519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (258 nt):
ATGTGGCCAAACAGTATCTTGGTCCTCATGACGCTCCTTATTTCCTCTACTCTGGTAACGGGAGGTGGAG
TC
AAAGGCGAGGAGAAAAGAGTTTGCCCGCCCGACTACGTCCGCTGCATCAGGCAAGATGATCCCCAGTG
T
TACAGTGACAATGACTGTGGAGATCAGGAGATATGCTGCTTCTGGCAATGTGGCTTCAAATGCGTGCTG
CCG
GTGAAAGACAACAGTGAAGAACAGATCCCTCAGAGTAAGGTGTGA


Translation (85 aa):
MWPNSILVLMTLLISSTLVTGGGVKGEEKRVCPPDYVRCIRQDDPQCYSDNDCGDQEICCFWQCGFKCVL
P
VKDNSE
EQIPQSKV



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser