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Report for CCDS7844.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7844.1 Public Homo sapiens 11 TMEM86A 24 110 108 CCDS HistoryNCBI Gene:144110Re-query CCDS DB by CCDS ID:7844.1Re-query CCDS DB by GeneID:144110See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7844.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000280734.3 ENSP00000280734.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000280734.3Link to Ensembl Protein Viewer:ENSP00000280734.2Re-query CCDS DB by Nucleotide ID:ENST00000280734Re-query CCDS DB by Protein ID:ENSP00000280734
Original member Current member NCBI NM_153347.3 NP_699178.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153347.3Link to Protein Sequence:NP_699178.1Re-query CCDS DB by Nucleotide ID:NM_153347Re-query CCDS DB by Protein ID:NP_699178Link to BLAST:NP_699178.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_699178.1 240 Q8N2M4 240 100% 0 0

Chromosomal Locations for CCDS 7844.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 18698887 18698907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 18700933 18701197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 18701573 18702009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (723 nt):
ATGGTGTCCCCGGTCACTGTGGTGAAGAGTGAAGGACCCAAACTGGTGCCGTTCTTCAAGGCCACCTGCG
TGTATTTTGTGCTCTGGCTGCCCTCATCTAGCCCATCGTGGGTCAGCACCCTCATCAAGTGCCTGCCTAT
CTTCTGCCTCTGGCTCTTCCTTCTGGCCCATGGCCTGGGATTCCTGCTGGCCCACCCCAGCGCCACCCGC
ATCTTTGTGGGGCTTGTCTTCTCTGCTGTAGGTGACGCCTTCCTCATCTGGCAGGACCAAGGATACTTCG
TGCATGGTCTGCTGATGTTTGCTGTGACCCACATGTTCTACGCCTCGGCCTTTGGCATGCAGCCACTGGC
TCTTCGGACAGGTCTGGTGATGGCAGCGCTGTCGGGCCTGTGCTATGCCCTCCTCTACCCATGCCTCTCA
GGTGCCTTCACCTACCTGGTGGGGGTCTATGTGGCCCTTATCGGCTTCATGGGCTGGCGAGCTATGGCAG
GGCTGCGGCTGGCCGGGGCAGACTGGCGCTGGACAGAGCTGGCAGCTGGCAGTGGTGCACTCTTCTTTAT
CATCTCAGACCTGACCATCGCCCTCAACAAATTCTGTTTTCCTGTGCCCTACTCTCGGGCGCTTATCATG
TCCACCTACTATGTGGCCCAGATGCTCGTCGCCTTGTCAGCTGTCGAAAGCCGGGAGCCTGTGGAACACT
ACAGACTGACCAAGGCCAACTGA

Translation (240 aa):
MVSPVTVVKSEGPKLVPFFKATCVYFVLWLPSSSPSWVSTLIKCLPIFCLWLFLLAHGLGFLLAHPSATR
IFVGLVFSAVGDAFLIWQDQGYFVHGLLMFAVTHMFYASAFGMQPLALRTGLVMAALSGLCYALLYPCLS
GAFTYLVGVYVALIGFMGWRAMAGLRLAGADWRWTELAAGSGALFFIISDLTIALNKFCFPVPYSRALIM
STYYVAQMLVALSAVESREPVEHYRLTKAN


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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