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Report for CCDS7203.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7203.1 Public Homo sapiens 10 FXYD4 24 110 108 CCDS HistoryNCBI Gene:53828Re-query CCDS DB by CCDS ID:7203.1Re-query CCDS DB by GeneID:53828See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7203.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000476166.6 ENSP00000473361.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000476166.6Link to Ensembl Protein Viewer:ENSP00000473361.1Re-query CCDS DB by Nucleotide ID:ENST00000476166Re-query CCDS DB by Protein ID:ENSP00000473361
Original member Current member EBI ENST00000616495.1 ENSP00000483791.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616495.1Link to Ensembl Protein Viewer:ENSP00000483791.1Re-query CCDS DB by Nucleotide ID:ENST00000616495Re-query CCDS DB by Protein ID:ENSP00000483791
Original member Current member NCBI NM_173160.3 NP_775183.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173160.3Link to Protein Sequence:NP_775183.1Re-query CCDS DB by Nucleotide ID:NM_173160Re-query CCDS DB by Protein ID:NP_775183Link to BLAST:NP_775183.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775183.1 89 P59646 89 100% 0 0

Chromosomal Locations for CCDS 7203.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 43373747 43373783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43374470 43374502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43374613 43374639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43375499 43375573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43375695 43375734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43376032 43376069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 43376147 43376166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (270 nt):
ATGGAGAGAGTGACCCTGGCCCTTCTCCTACTGGCAGGCCTGACTGCCTTGGAAGCCAATGACCCATTTG
CCAATAAAGACGATCCCTTCTACTATGACTGGAAAAACCTGCAGCTGAGCGGACTGATCTGCGGAGGGCT
CCTGGCCATTGCTGGGATCGCGGCAGTTCTGAGTGGCAAATGCAAATGCAAGAGCAGCCAGAAGCAGCAC
AGTCCTGTACCTGAGAAGGCCATCCCACTCATCACTCCAGGCTCTGCCACTACTTGCTGA

Translation (89 aa):
MERVTLALLLLAGLTALEANDPFANKDDPFYYDWKNLQLSGLICGGLLAIAGIAAVLSGKCKCKSSQKQH
SPVPEKAIPLITPGSATTC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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