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Report for CCDS13242.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13242.2 Public Homo sapiens 20 GGT7 24 110 108 CCDS HistoryNCBI Gene:2686Re-query CCDS DB by CCDS ID:13242.2Re-query CCDS DB by GeneID:2686See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 13242.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336431.10 ENSP00000338964.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000336431.10Link to Ensembl Protein Viewer:ENSP00000338964.5Re-query CCDS DB by Nucleotide ID:ENST00000336431Re-query CCDS DB by Protein ID:ENSP00000338964
Original member Current member NCBI NM_178026.3 NP_821158.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178026.3Link to Protein Sequence:NP_821158.2Re-query CCDS DB by Nucleotide ID:NM_178026Re-query CCDS DB by Protein ID:NP_821158Link to BLAST:NP_821158.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_821158.2 662 Q9UJ14-1 662 100% 0 0

Chromosomal Locations for CCDS 13242.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 34845328 34845491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34849961 34850060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34851231 34851368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34852155 34852272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34852389 34852538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34854531 34854619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34854796 34854923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34856806 34856893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34859443 34859639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34859969 34860042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34860254 34860321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34861445 34861562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34862814 34862965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34863313 34863548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34872647 34872815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1989 nt):
ATGGCGGCGGAGAACGAGGCCAGCCAGGAGAGCGCCCTGGGCGCCTACTCGCCAGTGGACTACATGAGCA
TCACCAGCTTCCCGCGGCTGCCCGAGGACGAGCCGGCGCCCGCGGCCCCGCTGAGGGGCCGCAAGGACGA
GGACGCCTTTCTGGGAGACCCCGACACCGACCCGGACTCCTTCCTGAAGTCTGCACGGCTGCAGCGGCTG
CCATCGTCGTCGTCGGAGATGGGCAGCCAAGACGGGTCGCCGCTACGCGAGACGCGCAAAGACCCGTTCT
CCGCCGCAGCGGCCGAGTGCTCCTGCCGCCAGGATGGGCTCACGGTCATCGTCACGGCCTGTCTCACCTT
CGCTACCGGTGTCACCGTGGCGCTGGTCATGCAGATCTACTTCGGGGACCCCCAGATCTTCCAGCAGGGT
GCCGTGGTGACCGATGCTGCCCGCTGCACTTCACTGGGCATCGAGGTGCTCAGTAAACAGGGATCTTCTG
TGGACGCAGCGGTGGCAGCAGCCTTGTGTTTGGGTATCGTGGCTCCACACAGTTCTGGCCTGGGCGGTGG
GGGCGTGATGCTGGTACATGACATCCGACGAAATGAGAGCCACCTAATTGATTTCCGGGAGTCCGCACCA
GGGGCCCTCAGGGAAGAGACCCTGCAAAGATCCTGGGAGACCAAGCCTGGGCTCTTGGTGGGGGTTCCCG
GAATGGTGAAGGGGCTACATGAAGCTCACCAGCTCTATGGCAGGCTGCCATGGTCCCAAGTCCTGGCCTT
TGCAGCAGCTGTGGCCCAAGATGGCTTCAACGTGACTCATGATCTAGCCCGTGCCCTGGCTGAACAGCTG
CCACCCAACATGTCCGAGCGCTTCCGGGAGACGTTCCTGCCATCGGGCCGCCCGCCACTACCTGGCTCGT
TGCTGCATCGGCCCGACCTGGCTGAGGTGCTGGATGTACTTGGCACCTCCGGCCCGGCTGCCTTCTACGC
AGGTGGCAACCTCACACTGGAGATGGTGGCCGAGGCTCAGCACGCAGGGGGTGTCATAACCGAAGAGGAC
TTCAGCAATTACAGCGCCCTTGTGGAGAAGCCTGTGTGTGGCGTGTACAGAGGCCACCTGGTTCTTAGTC
CCCCACCTCCGCACACGGGCCCTGCCCTCATCAGTGCTCTCAACATCCTGGAGGGCTTCAATCTCACCAG
CCTGGTATCCCGAGAACAGGCTCTTCACTGGGTGGCAGAGACCCTGAAGATTGCATTAGCCCTGGCCAGC
AGACTGGGAGATCCCGTCTATGATTCTACCATCACTGAGAGCATGGATGACATGCTCAGCAAGGTGGAGG
CCGCCTACCTCCGGGGCCATATCAATGACTCCCAGGCAGCCCCTGCCCCACTCCTGCCTGTCTATGAACT
AGACGGAGCTCCCACGGCTGCCCAGGTGCTGATCATGGGACCTGATGACTTCATTGTGGCCATGGTTAGC
TCCCTGAACCAGCCCTTTGGCAGCGGCCTTATCACCCCCTCGGGGATCCTGCTCAACAGCCAGATGCTGG
ACTTCTCCTGGCCCAACCGGACAGCTAACCACTCTGCACCCAGCCTGGAGAATTCAGTGCAGCCAGGGAA
GCGGCCACTCTCTTTCCTGCTGCCCACAGTGGTCCGACCCGCGGAGGGGCTCTGTGGAACCTACCTCGCT
CTGGGGGCCAATGGAGCTGCGCGGGGCCTCAGCGGCCTGACACAGGTTCTGCTGAATGTCCTGACCTTGA
ACCGGAACCTGAGTGACAGCCTGGCCCGCGGCCGCCTACACCCGGACCTGCAGTCCAACCTCCTGCAGGT
GGACAGTGAGTTCACAGAGGAAGAGATTGAGTTCCTGGAAGCCAGGGGTCACCACGTGGAGAAAGTAGAT
GTCTTATCCTGGGTCCATGGCAGCCGAAGGACCAACAACTTCATCATCGCTGTTAAGGACCCTCGGAGCC
CAGATGCAGCTGGAGCCACCATCCTGTAG

Translation (662 aa):
MAAENEASQESALGAYSPVDYMSITSFPRLPEDEPAPAAPLRGRKDEDAFLGDPDTDPDSFLKSARLQRL
PSSSSEMGSQDGSPLRETRKDPFSAAAAECSCRQDGLTVIVTACLTFATGVTVALVMQIYFGDPQIFQQG
AVVTDAARCTSLGIEVLSKQGSSVDAAVAAALCLGIVAPHSSGLGGGGVMLVHDIRRNESHLIDFRESAP
GALREETLQRSWETKPGLLVGVPGMVKGLHEAHQLYGRLPWSQVLAFAAAVAQDGFNVTHDLARALAEQL
PPNMSERFRETFLPSGRPPLPGSLLHRPDLAEVLDVLGTSGPAAFYAGGNLTLEMVAEAQHAGGVITEED
FSNYSALVEKPVCGVYRGHLVLSPPPPHTGPALISALNILEGFNLTSLVSREQALHWVAETLKIALALAS
RLGDPVYDSTITESMDDMLSKVEAAYLRGHINDSQAAPAPLLPVYELDGAPTAAQVLIMGPDDFIVAMVS
SLNQPFGSGLITPSGILLNSQMLDFSWPNRTANHSAPSLENSVQPGKRPLSFLLPTVVRPAEGLCGTYLA
LGANGAARGLSGLTQVLLNVLTLNRNLSDSLARGRLHPDLQSNLLQVDSEFTEEEIEFLEARGHHVEKVD
VLSWVHGSRRTNNFIIAVKDPRSPDAAGATIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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