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Report for CCDS57531.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57531.1 Public Mus musculus 7 Zfp850 23 108 98 CCDS HistoryNCBI Gene:100043772Re-query CCDS DB by CCDS ID:57531.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57531.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000180024.1 ENSMUSP00000137192.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000180024.1Link to Ensembl Protein Viewer:ENSMUSP00000137192.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000180024Re-query CCDS DB by Protein ID:ENSMUSP00000137192
Original member Current member EBI ENSMUST00000180502.7 ENSMUSP00000141063.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000180502.7Link to Ensembl Protein Viewer:ENSMUSP00000141063.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000180502Re-query CCDS DB by Protein ID:ENSMUSP00000141063
Original member Current member NCBI NM_001254951.1 NP_001241880.1 Accepted alive Link to Nucleotide Sequence:NM_001254951.1Link to Protein Sequence:NP_001241880.1Re-query CCDS DB by Nucleotide ID:NM_001254951Re-query CCDS DB by Protein ID:NP_001241880Link to BLAST:NP_001241880.1

Chromosomal Locations for CCDS 57531.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 27988712 27990522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28005219 28005317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28007314 28007440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28008384 28008416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2070 nt):
ATGGCCAGCTCTAATTCTCAAGACATGGTCTGTGGGTCAGTGACATTTAGGGATGTGGCTGTTGACTTCT
CTCAGGAAGAGTGGGCCTGCCTGGATGCTACTCAGAAGGTCTTATACAGGGACATAATGTTGGAGACCTA
CAGCAACCTCATTGCAGTGGTGGGAAGTTGCATTTCCAAGCCAGATCTGATCGTCTTACTAGAGCAGGAG
AAAGAGCTCTGGATGGCTGTGAAGGAAGAAACAGACAGGTTGAGCCCAGATTTGGAATCAGATTATGAAG
CTCAACAAATATCTCCAGACAACCACATATATACTATAAATTTACCCAAACAGACCATAAAGCATATAAG
TGAAACTTTTGAACTCAAGGGCTCCAGTTTTAGTAATGGCCACAGCTATAGTACATTCACGGGACTACAG
GGTTGTCAAGGAGATGTTGATCAAAAGATTAGTAACAAGGAAAAAATGCTCACTTATACCTGCCACACTC
TAACTCACAATACAGACAATGAATATGAATGTAAAGAGTATGGGAAGTACTTTGGTTGTAGGTCAACTCT
TATACAGCATCATAGTGTTCACACTGGAGAGAAGCCCTATGAATGTAAGGATTGTGGGAAGGCCTTCAGA
TTACAACAGCATCTTACAAGACATCAGAAAGCTCACAGTGGTGAGAGACCTTTTGAATGTAATGAATGTG
GTAAATTTTTCAAGCATGGCTCCAGCCTTGTTCAACATAAGATTATTCATGCTGGTGTGAAACCATATGA
ATGTAATGAATGTGGGAAAGCCTTTAATCGGCGCTCAAACTTCATGCGACATCAGAAAGTTCATTATGAC
AAGAAACCCTTTCAGTGTAAAGAATGTGGCAGTGCCTTCACTGTTCTAGCACAGCTCATCACTCAGCCTC
AGAACATTCATAATGGAAAGAAATCATTTGAGTGTAAACAGTGTGGAAAGATATTCAGTAATGGTTCCTA
CCATATCCAACACCAGAGTATTCATTCCAGTGAGAAAGCCTTTGGGTGTCATGTATGTGGGAAGGCTTTT
AGGCTTCAGGTATACCTTTCTGAGCATCAGAAAACTCACACTGATGAGAAGCCTTTCAAGTGTAATCTGT
GTGGGTCAGTCTTCAGACGTAAGTACCACCTTACTGAACATCAGAGAATCCATACTGATGTGAAACTATA
TCAGTGCAAGGAATGCGGGAAATTATTTCGTCGACGCTCAAATTTTATGGAACATCAGAGTATTCACACT
AATGTGAAACCTTTTAAGTGTGAGCTGTGTGGGTCAGCCTTCAGACTTCAATCACTACTTAGTCAACATC
AGAGAATTCATACTGATGAGAAACCATACCAGTGCAAGGAATGTGGGAAATTCTTTCGTCGAAGGTCAAA
TTTTACTGAGCATCTGAGTATTCACACTAACGTGAAACCTTTCAAGTGTGAGCTGTGTGGGTCAGCCTTC
AGACTTCAGTCCCTACTTAATCAACATCAGAGAATTCATACTGGTGAAAAACCATACCAGTGCAAGGAAT
GTGGGAAATTCTTTCGTAGAAGTTCAAATTTTACTGAACATCGGAGTATTCACACTAATGTGAAACCTTT
CAAGTGTGAGCTGTGTGGGTCAGCCTTCAGACTTCAGTCCTTACTTAGTCAACATCAGAGAATTCATACT
GGTGAAAAACCATACCAATGCAAGGAATGTGGGAAATTCTTTCGTCGAAGATCAAATTTTACTGAGCATC
TGAGTATTCATACTAATGTAAAACCTTTCAAGTGTGAGCTGTGTGGGTCAGACTTCAGACTTCAGTCCCT
ACTTAATCAACATCAGAGAATTCATACTGGTGAAAAACCGTATCAGTGCAAGGAATGTGGGAAATTCTTT
CGTAGAAGTTCAAATTTTACTGAGCACCTGAGTATTCACACTGGAAAGAAACCCTTCGATTGTAATAAAT
GTGGAAAAGTCTTTAGACTTAATATACATCTTATTCGCCACCAGAGATTTCATAATGGTGAGAAGGTAAA
GAGTGTGGAGAGGCCTTTCATCTTAAGAGCCATAAAATAA

Translation (689 aa):
MASSNSQDMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRDIMLETYSNLIAVVGSCISKPDLIVLLEQE
KELWMAVKEETDRLSPDLESDYEAQQISPDNHIYTINLPKQTIKHISETFELKGSSFSNGHSYSTFTGLQ
GCQGDVDQKISNKEKMLTYTCHTLTHNTDNEYECKEYGKYFGCRSTLIQHHSVHTGEKPYECKDCGKAFR
LQQHLTRHQKAHSGERPFECNECGKFFKHGSSLVQHKIIHAGVKPYECNECGKAFNRRSNFMRHQKVHYD
KKPFQCKECGSAFTVLAQLITQPQNIHNGKKSFECKQCGKIFSNGSYHIQHQSIHSSEKAFGCHVCGKAF
RLQVYLSEHQKTHTDEKPFKCNLCGSVFRRKYHLTEHQRIHTDVKLYQCKECGKLFRRRSNFMEHQSIHT
NVKPFKCELCGSAFRLQSLLSQHQRIHTDEKPYQCKECGKFFRRRSNFTEHLSIHTNVKPFKCELCGSAF
RLQSLLNQHQRIHTGEKPYQCKECGKFFRRSSNFTEHRSIHTNVKPFKCELCGSAFRLQSLLSQHQRIHT
GEKPYQCKECGKFFRRRSNFTEHLSIHTNVKPFKCELCGSDFRLQSLLNQHQRIHTGEKPYQCKECGKFF
RRSSNFTEHLSIHTGKKPFDCNKCGKVFRLNIHLIRHQRFHNGEKVKSVERPFILRAIK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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