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Report for CCDS59170.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59170.1 Public Homo sapiens X ARMCX4 24 110 108 CCDS HistoryNCBI Gene:100131755Re-query CCDS DB by CCDS ID:59170.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 59170.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000423738.5 ENSP00000404304.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000423738.5Link to Ensembl Protein Viewer:ENSP00000404304.3Re-query CCDS DB by Nucleotide ID:ENST00000423738Re-query CCDS DB by Protein ID:ENSP00000404304
Original member Current member NCBI NM_001256155.3 NP_001243084.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001256155.3Link to Protein Sequence:NP_001243084.2Re-query CCDS DB by Nucleotide ID:NM_001256155Re-query CCDS DB by Protein ID:NP_001243084Link to BLAST:NP_001243084.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243084.2 2290 Q5H9R4-1 2290 100% 0 0

Chromosomal Locations for CCDS 59170.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 101488590 101495462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6873 nt):
ATGGGCCGCATTCAGGAAGTGGGCTGGGTGACTGCAGGACTGGTGATCTGGGCTGGCACCTGCTACTACA
TTTACAAATTTACCAAGGGAAGAGCCCAGAGTGTGAGGACTCTTGCCAGAAATGGATCCACAGTTAAGAT
GGAGACTGTGGTTGGGGTACAGAGCCAGACCTTGGCCATAAATGAAGCAGAGATTAAGACTAAACCCCAA
GTCGAGATTGGAGCAGAAACTGGAGCAAGAAGTGGGCCTAGGGCTGAAGTAGAGACCAAGGCCACTGCTA
TAGCCATACACAGAGCCAACTCTCAGGCCAAGGCAATGGTTGGGGCAGAGCCAGAGACTCAATCTGAGTC
CAAAGTGGTGGCTGGAACACTGGTCATGACAGAGGCAGTGACTCTGACTGAGGTCAAGGCCAAAGCCAGG
GAAGTGGCCATGAAAGAAGCAGTGACCCAAACTGATGCTGAGGCTGGCAAAATAGTTAAGAAAGAAGCAG
TGACACAGACCAAGGCTAAAGCTTGGGCGCTGGTTGCCAAGACAGAGGCCAAGAGAGAAGCAATGACCCA
GACCAAAGCTGAAACTCATATATTGGCTGAAAAAGAGACAGAGATTAACAGAGTAATGGTTACACAGAGT
GAGACCTTGGCAGTACCCAGGGAAGTGGCCAAGATGGGGGCCACGAACAAGACTGGAATTGTGGATGAAA
CCAAGACAAGAGCTCTGGAAGAGACTGTGAGTGTGGCTAAGACTCAGTCTGAGGCCAGGCCTGGTGCCAC
AGTTGATGCTAGGGGAAATCCCAATGGCATGTCCAGGGAGGTGGCTGGAGTGGACATGAAGTCCTGTGCA
CAGTCTCAGGCTGTGACCAAGATCCAGGGTGATGACATGCCTGGTACTGGGGTTGAGGACATGGGGAATT
GTAAAACCATGTCTAGGGCAGAGTCTGGGGCAGACACGAGGGCTTCTGCTCAGCCTCAAATTTTTGCCAA
AACCCAGACTGAGGCCATTCCTGGGGCAAAGATTGATGCCGGGGGTAACACCAATGCCATGTGTAAGGTG
GGGGCAGGGGCAGATGTGAGAGCTTGTATACAACCTCAGACTGTGGCCAAGAAACAGGCTGAGGTGACGT
CTGGTGCCAGGGTTGATGGTAGGGGAAATACCAATGTCATATCTAAGGCAATAACTGGAGCTGACATGAG
AGCTGCTGCTCAGCCTCAAGCTGTTGCCAGTACTCACGCTGAGGCCATGTCTGATGCTAAGGTTAAGAAC
AGAGGCAATCCCAATGCCATGACTAAAGCAGGGGCCAAGGCAAACTTGAGGGCCAATTCCCAGGTTGAGG
CCTTGCCTGATGCCAGGGATAAGAGCAGAGGCAATCCCAATGTTATGGCTAAGGTGGGGGATGGGACAGA
CATGTTGTCCTGTACACAGCCTCAGCTTGTGGCCAGTGTTCAGGCTGATACCTTGTCTGATGGCAAAATT
AAGGTCAGGGGCAATGTCAATACCATGCCTAAGGAAGGAGCTGGGGTGGATATGAAGGCTCAAGGTATGG
CCCAGAGCCAGGGTGAAGCCTTACCTAATACTAGAGGTAAGGCTAGGGGCAAAGCCAAAGCCAAGTGTAA
GACAGGGCCTGGGATGGACATGAAAACCTGTACACAACCTCAGGCTGGGGTCAAGACCCCAGCTGAGGCC
TTGCTTGATTCCAGGGTTGATGGTAGGGGCAATCCTAATGCCACTTCTAAAGCCGGGACTAAGGCAGACC
AGAGGGTCTGTGGTCAGCCCCTGGTTGTGGCCAATCCCCAGGGTGAGGCCTTGCCTGGTGCCAAGAATAA
AGTCAAGGGCAATCCCCATACTGTGCTTAAGGTGGGGGCTGGAGAAGGTACAACAGACTCTGCCCAGCCT
GAGGCAGTGGTCAGTTTCCAGGGTGAGGCCTTGCTTGGCACCAAGAATAAAGTTAAGGGTAATCCCAATG
TTGTGCTTAAGGCAGAAGTTGGGGAAGGTGCAATGGGCACTGCCCAGCTTCAGATTATGGCCAGTTCCAA
GGGTGAGGCCTTGCTTGATTCTAAGAATAAGGTCAAGGGTAATTCCAATGCTGTGTCTAAGGCAGGGGCT
GGGACAGATACAACAGGCTCTGTCCAGCCCCAGATTGTGGCCAATTCCCAGGGTGAGGTCTTGCCTGGTG
CCAAGAATAAGATCAGAGGCAATCCCACTACTGTGCCTAATTCAGGGGTTGGGCCATATACAACAGACTC
TGCCCGGCTCCAGGCTGTGGCCAATTCTCAGGGTGAGGTCTTGCCTGGTGCCAAAAATAAGGTCAAGGCC
AATCTTAATGCTGTGTCTAAGGCAGAAGCTGGGATGGGTGCAACAGGCTCTGTCCAGCCCCAGGCTGTGG
CTAATTCCCATTGTGAGACCTTGCCTGGTGCCAAGAATAAGGTCAGGGGAAATTGGAATGCTGTGTCTAA
GGCAGGGGCTGGGATGGATACAAGGGGCTCTGCCCAGCCCCAGGCTGTGGCCAATTCCCAGGGTGAAGTC
TTGCCTGGTGCCAAGAATAAGGTCAAGGGCAATCCCAATGTCGTGTCTAAGGCAGGGGCCAGAGAAGATA
CAGTGGGCTCTACCCAGCCTCAGGTTTTGGCCAGCTCCCAGCGTGAGACCTTGCCTGGTGCCAGGAATAA
GGTCAAGGGCAATTCCAATGTTGTGTCTAAGGCAGGGGCCAGAGAAGATACAATGGGCTCTGCCCAGCCT
CAGGTTGTGGCCAACTCCCAGCGTGAGACCTTGCCTGGTGCCAGGAATAAGGTCAAGGGCAATTCCAATG
CTATTTCTAAGGCAGAGGCTGGGGCAGGCATAATGGGCTCTGTCCAGGTCCAGGTTGTGGCCAGTTTTCA
GGGTGAGGTCTTGCCTGGGGCCAAAAATAAGGTCAGGGGCAATTCCAATGCTGTGCCTAAGGCAGAGGCT
GGGGCAGATACAGTGGGCTCTGCCCAGCCCCAAGCTGTCGCTAATTCCCAGAGTGAGACCTTGCTTGGTG
CCAGGAATAAGGTCAAGGGCAATACCATTGCTGTGCCTAAAGCAGGGACTGGGGCAGGCACAAGGCACTC
TGCCCAGCCTCAGATTGTGGCCGGTTCCCAGGGTGAGACCTTGCCTGGGGCAAGGGACAAGTCTATGTCC
ACTTCTGAGGCAGAAGCCACAGCAGAAGATGAGGCCTATGCAAAGCCTGAGGCTGAGGCCATGCCCACTT
CTGAGAGTGAGGGTGGGTCAGGCACTCAAGCCTGCAGAAAGACTCAGCCTAACATCCATGACTACTACTG
GAATGGGATTGGTGTTGAAGACTGGATTGCTGCTGAGCGGTGGATCAAATTTAGGTTTCAGACCATGGAT
GGAGACTGGGAAAATAGCGTGTCCTGGGCTGATGATGAGAATGAAGCCAGTATTGGGTCCTGGAGTGGGG
CTAGTGATAAGGCTGGGATTATTCGGTCTTGGGCTGTGGCTTGTGATGAGACCAGTGTTAAGTCCTGGGC
TGGGGCCAGGGCTGAGAATGTGGTTGGTATTGGGACTTGGGCTAGAGCTGGGGAGCAGGCCAGTGGAGGG
CTCTGGGCTGGGGGTCAGACTAGTGAGGGGACCTGGGCTGGGGACAAGGCCAGTGGAGGAGCCTGGACTG
GGGCTGAGAACCAGGCCAGTGGGGGGTCTTGGGCTCTCGCTGGGAATCAGGCCATTGGAGAGCTTTGGGC
TGCGGGTCAGGCCAGTGATGGGTCCTGGCCTGGGGGACAGGCCAGTGGGGTGTCCTGGGTTGGGGAAGAG
GCCATTGGAGGGTCCTGGACTGGGGCTGAGAACCAAGCCAGTGAAGGGTCTTGGGCTGGAGCTGGGGCTG
GGAATATGAGTAGTGTTTCATACTGGGCTGGGGTTGTGGATCAGGCCGGTGGAGGGTCCTGGGCTGGGAC
TAGTGATCAATCTGGTGGTGGGTCCAAGCCTAGATTTGAGGATCAAGCCAGTGGAGAAGGGTCCTGGGCT
GGGGCTGGTGGCCAGGCTAGTGGAGGGTCAATGTTGGGGCCTGAGGACCAGTCCAGTGGAAGGTCTTGGG
CTGACACTGCAGACCAAGCCAGTGGAGGGTCTAGGCTGGGCCACGTAGATCAGTCCAGTGGTGGGGCCTG
GGCTGGGACACTTGATCAGTCTGGTGGTGGGTCCAAGCCTAGATTTGAAAATCAGACCACAGAAGAAGGG
TCTTGGGCTGGGGCTGGTGGCCAGGCTGGTGGAGGGTCCAAGGTGGGGCCTGAAGACCAGTCCAGTGGAA
GGTCATGGGCTAACTCTGGGGACCAAATCAGTGGAGGATTCTTAGTTGGGATTGTGGACCAGGCCAATGG
AGGGTCCTGGACTGGGGCTGGGCATCCAGCTAGTGTTGGGCCAAAGCCTATATTTGAGGATCAGGTCAGT
GGCAGAGGGTCCTGGGCTGATGCCAGGGAGCAGGTTGTTGGAGATTCTAGGCTGGGGCTTAGGGACCAGT
CTAGTGGAGATTCCTGGGCTGGCACTGGGGACCAGGCCAGTGGATGGTTCTGTGTTTGCCCTGGGAGTCA
GACGAATGGAGGGTCTTGGGGTGGGGCTAGTGGCCAGGATGTTGGAGGGTCTAGGCCAGGGCCCACGAAC
CAGTCCAGTGCTGGGTCCTGGGATAGCCCTGGGAGTCAGGTCAGTGGAAGCTGCTGGACTGGGGCTGGGG
CTGTGGATCAGGCTGGTGGTTGTTCCAAACCTGGATTTGAGGATCAGGCCATTGGAGGGGGGTTCTGGCC
TGGTGCTGGGGACCAGACTGGTGGAGGCTCCAGGCCAGGGTCTGAGGATCAGTCCAGTGGAATAGGTTCC
TGGGGTGTGGCTGGTGGCCAGGTCCTTGGGGGAGCTAGGCCGGGGCCTGCAGACCAGTCCAGTGGTGGGT
CCTGGGCTGGCACTGGGAATCAGTCCAGTGGAAGGTCCTGGATTGGGCCTGGGGATCAGGCTGTTGACTG
TTCCAAGCCTGAATTTGAGGATCAGGCTTGTGGAGGAGGCTCCTGGGCTGGTGCTGGGAGCCAAGCCAGT
GGAGAATCCTGGGCTGGATCTAGGCCTGGGAATGAGGCCATTGGAGGATCTAGGATGGGATCTGAGGACC
AGGCCACTGGAGGATCCTGGGCTAGATCTGAGGACCAGGCCAGTGGAAGGTTCCAGGTCAGTTTTGAGGT
GGAGGCCAATGAAGGATTCTGGTTTGGGCCTGGAGCTGAGGCCGTTATAGGGTCTTGGTGCTGGACAGAG
GAAAAAGCTGATATTGTGTCCAGGCCTGATGATAAAGATGAGGCCACTACTGCATCCAGATCAGGGGCTG
GGGAAGAGGCCATGATTTGTTCTAGGATTGAGGCTGAGAACAAGGCTAGTAGTGGCTCCTGGATTAGATC
TGAGGAGGTGGCTTATATGGGCTCCTGTGTAGGGGCTGAGGCTGGGGCTGGGGCTGAGGCTGGGGCTGGG
GCTGAGGCTGGGGCTGGGGCTGGGGCTGAGGCTGGGGCTGAGGCTGGGGCTGGGGCTGGGGCTGGGCCTG
GGACTGAGTCTGGGGCTGGGATTTGGTCCTGGGATGGAGATGCAACCACTGTAGAGTCTAGGCTTGGGGC
TGGGGAAGAGGCTGGTGTAGAGTCCTGGACCTTGGCTAGGAATGTGGGAGAGGATGAGCTAAGTAGAGAG
TCCAGCCCTGATATTGAGGAGATCAGTTTAAGGTCTTTGTTTTGGGCTGAGAGTGAGAACAGTAATACGT
TCAGATCTAAGAGTGGGAAAGATGCCAGTTTTGAGTCTGGAGCTGGGGATAACACCAGCATCAAGGATAA
GTTTGAGGCTGCTGGTGGAGTTGATATAGGGTCTTGGTTCTGTGCTGGTAATGAAAACACAAGTGAGGAC
AAATCTGCACCTAAGGCTAAAGCCAAAAAGTCATCTGAGTCAAGAGGCATATATCCGTACATGGTCCCTG
GGGCAGGAATGGGGTCATGGGATGGAGCCATGATCTGGTCGGAAACTAAGTTTGCACACCAAAGTGAGGC
CAGCTTCCCAGTTGAAGATGAGTCCAGAAAACAAACCAGGACTGGGGAAAAAACTCGGCCCTGGTCTTGC
CGCTGTAAACACGAAGCTAATATGGATCCACGAGATCTTGAAAAACTCATTTGCATGATTGAGATGACTG
AAGATCCTTCTGTTCATGAAATAGCCAATAATGCTTTATATAACAGTGCTGATTATTCTTATTCTCATGA
AGTTGTTCGTAATGTAGGTGGAATTTCAGTTATTGAAAGCTTGCTCAATAATCCCTACCCCAGTGTTAGG
CAGAAGGCTTTAAATGCACTGAATAATATCTCAGTGGCTGCTGAAAACCATAGGAAGGTTAAAACTTACT
TAAACCAAGTATGTGAAGACACTGTCACCTATCCCTTGAATTCAAATGTGCAGTTGGCTGGACTAAGGTT
GATAAGGCATCTGACTATTACCAGTGAATATCAGCATATGGTTACAAATTATATTTCAGAATTTCTTCGT
TTGTTAACGGTGGGAAGTGGAGAAACTAAAGACCATGTTTTGGGAATGCTTTTGAATTTCTCTAAAAATC
CATCTATGACAAAAGACTTGCTCATTGCCAATGCACCAACATCACTGATTAACATTTTTAGCAAGAAAGA
GACAAAGGAGAATATTCTTAATGCTCTTTCACTATTTGAAAATATAAATTACCATTTTAAAAGAAGAGCA
AAAGCATTTACCCAGGACAAATTCAGTAAAAATTCCCTTTATTTCCTATTCCAACGACCTAAAGCATGTG
CCAAGAAACTTCGAGCCTTAGCAGCAGAATGCAATGACCCTGAGGTGAAAGAGAGAGTTGAGCTATTAAT
AAGTAAACTCTGA

Translation (2290 aa):
MGRIQEVGWVTAGLVIWAGTCYYIYKFTKGRAQSVRTLARNGSTVKMETVVGVQSQTLAINEAEIKTKPQ
VEIGAETGARSGPRAEVETKATAIAIHRANSQAKAMVGAEPETQSESKVVAGTLVMTEAVTLTEVKAKAR
EVAMKEAVTQTDAEAGKIVKKEAVTQTKAKAWALVAKTEAKREAMTQTKAETHILAEKETEINRVMVTQS
ETLAVPREVAKMGATNKTGIVDETKTRALEETVSVAKTQSEARPGATVDARGNPNGMSREVAGVDMKSCA
QSQAVTKIQGDDMPGTGVEDMGNCKTMSRAESGADTRASAQPQIFAKTQTEAIPGAKIDAGGNTNAMCKV
GAGADVRACIQPQTVAKKQAEVTSGARVDGRGNTNVISKAITGADMRAAAQPQAVASTHAEAMSDAKVKN
RGNPNAMTKAGAKANLRANSQVEALPDARDKSRGNPNVMAKVGDGTDMLSCTQPQLVASVQADTLSDGKI
KVRGNVNTMPKEGAGVDMKAQGMAQSQGEALPNTRGKARGKAKAKCKTGPGMDMKTCTQPQAGVKTPAEA
LLDSRVDGRGNPNATSKAGTKADQRVCGQPLVVANPQGEALPGAKNKVKGNPHTVLKVGAGEGTTDSAQP
EAVVSFQGEALLGTKNKVKGNPNVVLKAEVGEGAMGTAQLQIMASSKGEALLDSKNKVKGNSNAVSKAGA
GTDTTGSVQPQIVANSQGEVLPGAKNKIRGNPTTVPNSGVGPYTTDSARLQAVANSQGEVLPGAKNKVKA
NLNAVSKAEAGMGATGSVQPQAVANSHCETLPGAKNKVRGNWNAVSKAGAGMDTRGSAQPQAVANSQGEV
LPGAKNKVKGNPNVVSKAGAREDTVGSTQPQVLASSQRETLPGARNKVKGNSNVVSKAGAREDTMGSAQP
QVVANSQRETLPGARNKVKGNSNAISKAEAGAGIMGSVQVQVVASFQGEVLPGAKNKVRGNSNAVPKAEA
GADTVGSAQPQAVANSQSETLLGARNKVKGNTIAVPKAGTGAGTRHSAQPQIVAGSQGETLPGARDKSMS
TSEAEATAEDEAYAKPEAEAMPTSESEGGSGTQACRKTQPNIHDYYWNGIGVEDWIAAERWIKFRFQTMD
GDWENSVSWADDENEASIGSWSGASDKAGIIRSWAVACDETSVKSWAGARAENVVGIGTWARAGEQASGG
LWAGGQTSEGTWAGDKASGGAWTGAENQASGGSWALAGNQAIGELWAAGQASDGSWPGGQASGVSWVGEE
AIGGSWTGAENQASEGSWAGAGAGNMSSVSYWAGVVDQAGGGSWAGTSDQSGGGSKPRFEDQASGEGSWA
GAGGQASGGSMLGPEDQSSGRSWADTADQASGGSRLGHVDQSSGGAWAGTLDQSGGGSKPRFENQTTEEG
SWAGAGGQAGGGSKVGPEDQSSGRSWANSGDQISGGFLVGIVDQANGGSWTGAGHPASVGPKPIFEDQVS
GRGSWADAREQVVGDSRLGLRDQSSGDSWAGTGDQASGWFCVCPGSQTNGGSWGGASGQDVGGSRPGPTN
QSSAGSWDSPGSQVSGSCWTGAGAVDQAGGCSKPGFEDQAIGGGFWPGAGDQTGGGSRPGSEDQSSGIGS
WGVAGGQVLGGARPGPADQSSGGSWAGTGNQSSGRSWIGPGDQAVDCSKPEFEDQACGGGSWAGAGSQAS
GESWAGSRPGNEAIGGSRMGSEDQATGGSWARSEDQASGRFQVSFEVEANEGFWFGPGAEAVIGSWCWTE
EKADIVSRPDDKDEATTASRSGAGEEAMICSRIEAENKASSGSWIRSEEVAYMGSCVGAEAGAGAEAGAG
AEAGAGAGAEAGAEAGAGAGAGPGTESGAGIWSWDGDATTVESRLGAGEEAGVESWTLARNVGEDELSRE
SSPDIEEISLRSLFWAESENSNTFRSKSGKDASFESGAGDNTSIKDKFEAAGGVDIGSWFCAGNENTSED
KSAPKAKAKKSSESRGIYPYMVPGAGMGSWDGAMIWSETKFAHQSEASFPVEDESRKQTRTGEKTRPWSC
RCKHEANMDPRDLEKLICMIEMTEDPSVHEIANNALYNSADYSYSHEVVRNVGGISVIESLLNNPYPSVR
QKALNALNNISVAAENHRKVKTYLNQVCEDTVTYPLNSNVQLAGLRLIRHLTITSEYQHMVTNYISEFLR
LLTVGSGETKDHVLGMLLNFSKNPSMTKDLLIANAPTSLINIFSKKETKENILNALSLFENINYHFKRRA
KAFTQDKFSKNSLYFLFQRPKACAKKLRALAAECNDPEVKERVELLISKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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