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Report for CCDS86601.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86601.1 Public Homo sapiens 17 FAM187A 24 110 108 CCDS HistoryNCBI Gene:100528020Re-query CCDS DB by CCDS ID:86601.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86601.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331733.4 ENSP00000329499.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000331733.4Link to Ensembl Protein Viewer:ENSP00000329499.4Re-query CCDS DB by Nucleotide ID:ENST00000331733Re-query CCDS DB by Protein ID:ENSP00000329499
Original member Current member NCBI NM_001258400.2 NP_001245329.1 Accepted alive Link to Nucleotide Sequence:NM_001258400.2Link to Protein Sequence:NP_001245329.1Re-query CCDS DB by Nucleotide ID:NM_001258400Re-query CCDS DB by Protein ID:NP_001245329Link to BLAST:NP_001245329.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001245329.1 413 A6NFU0 413 100% 0 0

Chromosomal Locations for CCDS 86601.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 44903830 44905071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1242 nt):
ATGCACCTGGCCCTCACCACTGTGCTCCTGTGGGCATGGGGGCTCCAGGCCTTTGAAATTGTGGAGAAGG
AAAACATTTTTCAGAGGACCCCCTGCCCTGCTTTCCTGATGTTTGAAAATGCAGCCTACCTGGCCGACAT
GAGCTTTGAGCTTCCCTGTCACTGCAAACCCGAAGAGGTGCCAGCTGTAGTCTGGTTCTACCAAAAGCAC
CTAGGTAGCAGCCACACCAAAGTGCTGACGGACTTTGATGGGCGGGTGCTGACGGAGGCAGCCCAGGTAC
GTGTGGGCAGCGACATGCTGACCCGCTTCAGCATCCGCATGTTCAGCTTGTTGGTTTTCAGGGCTCAGTC
TGAGGACTCAGGCCTGTACTTCTGCGGCACCCGCAAGGGGGACTACTTTTACGCCTACGATGTGGACATC
CAGAACAGTGAGGGAATGGTGGCCACTTTCCAGGACAAGGGCCAGGAGCCCTTTGCAGATGAATACTATG
GGCACCTCCATGTCTTCACCACCTTCTGGGAATGGACCCCCTGTGACCGCTGCGGAGTGCGTGGGGAGCA
GTGGCGCATCGGCCTCTGCTACCTGCAGAGCCCAGACCTCTCCCCACGCTACCTCAAGGCCGTGCCCGAT
GTGGTGTCTTGTGGCTCAAGGGCTGTGCCAAGGAAGCTGCGGACCAAGGCCAGGGACCACACGCCTGAGG
TGCTGGTTCGGAGCTGCTTAGTACCCTGTGAGAAGACAAAGACCATCCGGGAGGGCGTGCTGGCCATCAT
TAACTATGTGTCCAAAGTGGGCAGCCGGCCCTGGGTGCCCCAGGTGCCCATTCAGTTCCACCAGCAGAGA
CTGGGCCATGGACTCATCATCTCCTGTCCTGGGGCCCGGCCAGAGCATGCAGTGGCCTGGGACAAAGACC
GCCAGCACCTCTACCGCACACAGTACCTGAAGGGTGTCAACAGGTCCATGAGGGTGTTCATTGACCACGG
CAACCAGCTCCACATCCGCTTCACCCAGCTGGATGACCGGGGCATCTACTATTGCTGGAGGCAGGGTGTG
CTAGTTGCTGGCTTCCGGCTGGGTGTGACATCTCATGGGCACTACCCAGCCTCGTTCTCAGATCCTGAGA
CTCGCTCGGCTGTGGAGCTCACCCTGATAGGCTACCTGCTCATCACAGCAGTCTTTGTCACCATTCACTT
CTGTCGTTGCTGCTGCTACTTATTTCACTGTTGTCCCAGCTTCTCCCCCTAG

Translation (413 aa):
MHLALTTVLLWAWGLQAFEIVEKENIFQRTPCPAFLMFENAAYLADMSFELPCHCKPEEVPAVVWFYQKH
LGSSHTKVLTDFDGRVLTEAAQVRVGSDMLTRFSIRMFSLLVFRAQSEDSGLYFCGTRKGDYFYAYDVDI
QNSEGMVATFQDKGQEPFADEYYGHLHVFTTFWEWTPCDRCGVRGEQWRIGLCYLQSPDLSPRYLKAVPD
VVSCGSRAVPRKLRTKARDHTPEVLVRSCLVPCEKTKTIREGVLAIINYVSKVGSRPWVPQVPIQFHQQR
LGHGLIISCPGARPEHAVAWDKDRQHLYRTQYLKGVNRSMRVFIDHGNQLHIRFTQLDDRGIYYCWRQGV
LVAGFRLGVTSHGHYPASFSDPETRSAVELTLIGYLLITAVFVTIHFCRCCCYLFHCCPSFSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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