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Report for CCDS81909.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81909.1 Public Homo sapiens 15 COMMD4 24 110 108 CCDS HistoryNCBI Gene:54939Re-query CCDS DB by CCDS ID:81909.1Re-query CCDS DB by GeneID:54939See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81909.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000564815.5 ENSP00000455249.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000564815.5Link to Ensembl Protein Viewer:ENSP00000455249.1Re-query CCDS DB by Nucleotide ID:ENST00000564815Re-query CCDS DB by Protein ID:ENSP00000455249
Original member Current member NCBI NM_001321847.2 NP_001308776.1 Accepted alive Link to Nucleotide Sequence:NM_001321847.2Link to Protein Sequence:NP_001308776.1Re-query CCDS DB by Nucleotide ID:NM_001321847Re-query CCDS DB by Protein ID:NP_001308776Link to BLAST:NP_001308776.1

Chromosomal Locations for CCDS 81909.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 75336090 75336092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75338062 75338133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75338646 75338685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75338985 75339104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75339264 75339344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75339702 75339878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 75339965 75340005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (534 nt):
ATGAGGTTCCGGTTCTGTGGTGATCTGGACTGTCCCGACTGGGTCCTGGCAGAAATCAGCACGCTGGCCA
AGATGTATGAGAAGATCCTGAAGCTCACGGCTGACGCCAAGTTTGAGTCAGGCGATGTGAAGGCCACAGT
GGCAGTGCTGAGTTTCATCCTCTCCAGTGCGGCCAAGCACAGTGTCGATGGCGAATCCTTGTCCAGTGAA
CTGCAGCAGCTGGGGCTGCCCAAAGAGCACGCGGCCAGCCTGTGCCGCTGTTATGAGGAGAAGCAAAGCC
CCTTGCAGAAGCACTTGCGGGTCTGCAGCCTACGCATGAATAGGTTGGCAGGTGTGGGCTGGCGGGTGGA
CTACACCCTGAGCTCCAGCCTGCTGCAATCCGTGGAAGAGCCCATGGTGCACCTGCGGCTGGAGGTGGCA
GCTGCCCCAGGGACCCCAGCCCAGCCTGTTGCCATGTCCCTCTCAGCAGACAAGTTCCAGGTCCTCCTGG
CAGAACTGAAGCAGGCCCAGACCCTGATGAGCTCCCTGGGCTGA

Translation (177 aa):
MRFRFCGDLDCPDWVLAEISTLAKMYEKILKLTADAKFESGDVKATVAVLSFILSSAAKHSVDGESLSSE
LQQLGLPKEHAASLCRCYEEKQSPLQKHLRVCSLRMNRLAGVGWRVDYTLSSSLLQSVEEPMVHLRLEVA
AAPGTPAQPVAMSLSADKFQVLLAELKQAQTLMSSLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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