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Report for CCDS32918.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32918.1 Public Homo sapiens 19 ZNF443 24 110 108 CCDS HistoryNCBI Gene:10224Re-query CCDS DB by CCDS ID:32918.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32918.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301547.10 ENSP00000301547.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301547.10Link to Ensembl Protein Viewer:ENSP00000301547.5Re-query CCDS DB by Nucleotide ID:ENST00000301547Re-query CCDS DB by Protein ID:ENSP00000301547
Original member Current member NCBI NM_005815.5 NP_005806.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005815.5Link to Protein Sequence:NP_005806.3Re-query CCDS DB by Nucleotide ID:NM_005815Re-query CCDS DB by Protein ID:NP_005806Link to BLAST:NP_005806.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005806.3 671 Q9Y2A4 671 100% 0 0

Chromosomal Locations for CCDS 32918.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12430156 12431980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12432377 12432437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12433071 12433197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12440912 12440914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2016 nt):
ATGGCCTCAGTGGCTTTAGAGGATGTGGCTGTGAACTTCACCCGAGAAGAGTGGGCTTTGCTGGGTCCTT
GTCAGAAGAATCTCTACAAAGATGTGATGCAGGAAACCATCAGGAACCTGGATTGTGTAGTAATGAAATG
GAAAGACCAGAACATTGAAGATCAATATAGATATCCCAGGAAAAATCTAAGATGTCGTATGTTAGAGAGA
TTTGTTGAAAGTAAAGATGGAACTCAATGTGGAGAAACATCTAGCCAGATTCAAGATAGTATTGTGACCA
AGAACACTCTTCCTGGAGTAGGTCCTTGTGAAAGCAGTATGAGAGGAGAAAAAGTCATGGGTCATTCATC
CCTTAATTGTTACATCAGAGTTGGTGCTGGGCACAAACCACATGAGTATCATGAATGTGGAGAGAAGCCA
GATACGCATAAACAACGTGGGAAAGCCTTCAGTTACCACAACTCATTTCAAACACATGAGAGGCTTCACA
CTGGAAAGAAACCATATGATTGTAAAGAATGTGGGAAGTCCTTCAGTTCTTTGGGAAACCTTCAAAGACA
CATGGCAGTGCAGCGTGGAGATGGACCTTATAAATGTAAGTTGTGTGGGAAAGCGTTTTTTTGGCCCAGT
TTATTACATATGCATGAAAGAACGCACACTGGAGAGAAACCATATGAATGTAAGCAGTGTTCTAAAGCCT
TTTCTTTTTACAGTTCCTATCTAAGACATGAAAGAACACATACTGGGGAGAAACCGTATGAATGTAAACA
GTGTTCTAAAGCCTTTCCTTTTTACAGTTCCTATCTAAGACATGAAAGAACACATACTGGGGAGAAACCA
TATAAATGTAAGCAGTGTTCTAAAGCCTTCCCTGATTCCAGTTCTTGTCTAATACATGAAAGAACTCACA
CTGGAGAGAAACCCTATACATGTAAACAATGTGGGAAAGCCTTCAGTGTTTCCGGTTCCCTTCAAAGACA
TGAAACCACTCACAGTGCAGAGAAACCCTATGCATGTCAGCAATGTGGGAAAGCGTTTCATCATCTGGGA
AGCTTTCAAAGACACATGATAAGGCACACTGGAAATGGACCTCATAAATGTAAGATATGTGGGAAAGGCT
TTGATTGTCCTAGTTCACTGCAAAGTCATGAAAGAACTCACACTGGAGAGAAACCCTATGAATGCAAGCA
GTGTGGGAAAGCATTATCTCATCGCTCAAGCTTTCGAAGTCATATGATAATGCACACTGGAGATGGACCT
CATAAATGCAAGGTATGTGGGAAAGCCTTTGTTTATCCCAGTGTATTTCAAAGACATGAAAGGACTCACA
CTGCAGAGAAACCCTATAAATGTAAACAATGTGGCAAAGCCTACCGTATTTCCAGTTCCCTTCGAAGGCA
TGAAACAACTCATACTGGAGAGAAACCCTATAAATGCAAACTTGGGAAAGCCTGTATTGATTTCTGTTCC
TTTCAAAATCACAAAACAACTCACACTGGAGAGAAGCCATATGAGTGTAAGGAATGTGGGAAAGCATTCA
GTCGTTTCAGATACCTTTCTCGACATAAAAGGACTCACACAGGAGAGAAACCTTATGAGTGTAAAACATG
TAGGAAAGCCTTCGGTCATTATGATAACTTAAAGGTACATGAAAGAATTCACTCTGGAGAGAAGCCGTAT
GAATGTAAGGAATGTGGGAAAGCATTCTCTTGGCTCACTTGCTTTCTACGACATGAAAGAATTCACATGA
GAGAGAAATCCTATGAATGTCCACAATGTGGTAAAGCCTTCACTCATTCCCGTTTTCTTCAAGGACATGA
AAAAACTCATACTGGAGAGAACCCGTATGAATGTAAGGAATGTGGGAAAGCATTTGCTTCTCTCAGTTCC
TTGCATAGACATAAAAAGACTCACTGGAAAAAAACTCACACTGGAGAGAACCCATATGAATGTAAGGAAT
GTGGGAAAGCATTTGCTTCTCTCAGTTCCTTGCATAGACATAAAAAGACTCACTAG

Translation (671 aa):
MASVALEDVAVNFTREEWALLGPCQKNLYKDVMQETIRNLDCVVMKWKDQNIEDQYRYPRKNLRCRMLER
FVESKDGTQCGETSSQIQDSIVTKNTLPGVGPCESSMRGEKVMGHSSLNCYIRVGAGHKPHEYHECGEKP
DTHKQRGKAFSYHNSFQTHERLHTGKKPYDCKECGKSFSSLGNLQRHMAVQRGDGPYKCKLCGKAFFWPS
LLHMHERTHTGEKPYECKQCSKAFSFYSSYLRHERTHTGEKPYECKQCSKAFPFYSSYLRHERTHTGEKP
YKCKQCSKAFPDSSSCLIHERTHTGEKPYTCKQCGKAFSVSGSLQRHETTHSAEKPYACQQCGKAFHHLG
SFQRHMIRHTGNGPHKCKICGKGFDCPSSLQSHERTHTGEKPYECKQCGKALSHRSSFRSHMIMHTGDGP
HKCKVCGKAFVYPSVFQRHERTHTAEKPYKCKQCGKAYRISSSLRRHETTHTGEKPYKCKLGKACIDFCS
FQNHKTTHTGEKPYECKECGKAFSRFRYLSRHKRTHTGEKPYECKTCRKAFGHYDNLKVHERIHSGEKPY
ECKECGKAFSWLTCFLRHERIHMREKSYECPQCGKAFTHSRFLQGHEKTHTGENPYECKECGKAFASLSS
LHRHKKTHWKKTHTGENPYECKECGKAFASLSSLHRHKKTH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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