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Report for CCDS87448.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87448.1 Public Homo sapiens 6 HEBP2 24 110 108 CCDS HistoryNCBI Gene:23593Re-query CCDS DB by CCDS ID:87448.1Re-query CCDS DB by GeneID:23593See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87448.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367697.7 ENSP00000356670.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367697.7Link to Ensembl Protein Viewer:ENSP00000356670.3Re-query CCDS DB by Nucleotide ID:ENST00000367697Re-query CCDS DB by Protein ID:ENSP00000356670
Original member Current member NCBI NM_001326381.2 NP_001313310.1 Accepted alive Link to Nucleotide Sequence:NM_001326381.2Link to Protein Sequence:NP_001313310.1Re-query CCDS DB by Nucleotide ID:NM_001326381Re-query CCDS DB by Protein ID:NP_001313310Link to BLAST:NP_001313310.1

Chromosomal Locations for CCDS 87448.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 138404496 138404597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 138405145 138405280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 138405971 138406033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 138412880 138412929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGGCCGAGCCGCTCCAGCCAGACCCCGGGGCGGCCGAGGACGCGGCGGCCCAAGCTGTGGAGACGCCGG
GCTGGAAGGCCCCGGAGGACGCCGGCCCCCAGCCCGGAAGTTATGAGATCCGACACTATGGACCAGCCAA
GTGGGTCAGCACGTCCGTGGAGTCTATGGACTGGGATTCAGCCATCCAGACGGGCTTTACGAAACTGAAC
AGCTACATTCAAGGCAAAAACGAGAAAGAGATGAAAATAAAGATGACAGCTCCAGTGACAAGCTACGTGG
AGCCTGGTTCAGGTCCTTTTAGTCTTTCGATGGATTTTCTAGTGCCCAAAAGAATCAAGAACAACTTTTG
A

Translation (116 aa):
MAEPLQPDPGAAEDAAAQAVETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSVESMDWDSAIQTGFTKLN
SYIQGKNEKEMKIKMTAPVTSYVEPGSGPFSLSMDFLVPKRIKNNF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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