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Report for CCDS87316.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87316.1 Public Homo sapiens 5 ERAP2 24 110 108 CCDS HistoryNCBI Gene:64167Re-query CCDS DB by CCDS ID:87316.1Re-query CCDS DB by GeneID:64167See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87316.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000510309.1 ENSP00000425758.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000510309.1Link to Ensembl Protein Viewer:ENSP00000425758.1Re-query CCDS DB by Nucleotide ID:ENST00000510309Re-query CCDS DB by Protein ID:ENSP00000425758
Original member Current member NCBI NM_001329233.1 NP_001316162.1 Accepted alive Link to Nucleotide Sequence:NM_001329233.1Link to Protein Sequence:NP_001316162.1Re-query CCDS DB by Nucleotide ID:NM_001329233Re-query CCDS DB by Protein ID:NP_001316162Link to BLAST:NP_001316162.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001316162.1 350 Q6P179-4 350 100% 0 0

Chromosomal Locations for CCDS 87316.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 96879686 96880260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96883792 96883930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96886655 96886789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 96889185 96889388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1053 nt):
ATGTTCCATTCTTCTGCAATGGTTAATTCACACAGAAAACCAATGTTTAACATTCACAGAGGATTTTACT
GCTTAACAGCCATCTTGCCCCAAATATGCATTTGTTCTCAGTTCTCAGTGCCATCTAGTTATCACTTCAC
TGAGGATCCTGGGGCTTTCCCAGTAGCCACTAATGGGGAACGATTTCCTTGGCAGGAGCTAAGGCTCCCC
AGTGTGGTCATTCCTCTCCATTATGACCTCTTTGTCCACCCCAATCTCACCTCTCTGGACTTTGTTGCAT
CTGAGAAGATCGAAGTCTTGGTCAGCAATGCTACCCAGTTTATCATCTTGCACAGCAAAGATCTTGAAAT
CACGAATGCCACCCTTCAGTCAGAGGAAGATTCAAGATACATGAAACCAGGAAAAGAACTGAAAGTTTTG
AGTTACCCTGCTCATGAACAAATTGCACTGCTGGTTCCAGAGAAACTTACGCCTCACCTGAAATACTATG
TGGCTATGGACTTCCAAGCCAAGTTAGGTGATGGCTTTGAAGGGTTTTATAAAAGCACATACAGAACTCT
TGGTGGTGAAACAAGAATTCTTGCAGTAACAGATTTTGAGCCAACCCAGGCACGCATGGCTTTCCCTTGC
TTTGATGAACCGTTGTTCAAAGCCAACTTTTCAATCAAGATACGAAGAGAGAGCAGGCATATTGCACTAT
CCAACATGCCAAAGGTTAAGACAATTGAACTTGAAGGAGGTCTTTTGGAAGATCACTTTGAAACTACTGT
AAAAATGAGTACATACCTTGTAGCCTACATAGTTTGTGATTTCCACTCTCTGAGTGGCTTCACTTCATCA
GGGGTCAAGGTGTCCATCTATGCATCCCCAGACAAACGGAATCAAACACATTATGCTTTGCAGGCATCAC
TGAAGCTACTTGATTTTTATGAAAAGTACTTTGATATCTACTATCCACTCTCCAAACTGGGTATGTTCAA
ATTCCACATTATTGTCTTCATTTTTGCTCATAAAACTTGCTTTGATCTCTTCCCTCTTTCTCTTTCTATG
TGA

Translation (350 aa):
MFHSSAMVNSHRKPMFNIHRGFYCLTAILPQICICSQFSVPSSYHFTEDPGAFPVATNGERFPWQELRLP
SVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVL
SYPAHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPC
FDEPLFKANFSIKIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSS
GVKVSIYASPDKRNQTHYALQASLKLLDFYEKYFDIYYPLSKLGMFKFHIIVFIFAHKTCFDLFPLSLSM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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