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Report for CCDS10916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10916.1 Public Homo sapiens 16 CFDP1 24 110 108 CCDS HistoryNCBI Gene:10428Re-query CCDS DB by CCDS ID:10916.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10916.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000283882.4 ENSP00000283882.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000283882.4Link to Ensembl Protein Viewer:ENSP00000283882.3Re-query CCDS DB by Nucleotide ID:ENST00000283882Re-query CCDS DB by Protein ID:ENSP00000283882
Original member Current member NCBI NM_006324.3 NP_006315.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006324.3Link to Protein Sequence:NP_006315.1Re-query CCDS DB by Nucleotide ID:NM_006324Re-query CCDS DB by Protein ID:NP_006315Link to BLAST:NP_006315.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006315.1 299 Q9UEE9-1 299 100% 0 0

Chromosomal Locations for CCDS 10916.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 75293952 75294042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75305024 75305182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75395090 75395209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75411825 75411952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75412535 75412754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75414578 75414695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75433289 75433352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (900 nt):
ATGGAGGAATTCGACTCCGAAGACTTCTCTACGTCGGAGGAGGACGAGGACTACGTGCCGTCGGGTGGAG
AGTATAGTGAAGATGATGTAAATGAATTAGTGAAGGAAGATGAAGTGGATGGTGAAGAGCAGACACAGAA
AACCCAAGGGAAAAAAAGAAAGGCCCAGAGCATTCCAGCCAGGAAGAGAAGACAAGGTGGCCTCTCATTA
GAAGAAGAGGAAGAGGAGGATGCCAATTCAGAATCTGAGGGAAGCAGTAGTGAGGAGGAAGATGACGCTG
CAGAGCAGGAAAAAGGCATTGGATCAGAGGATGCCAGGAAAAAGAAGGAGGACGAACTCTGGGCCAGCTT
CCTCAATGATGTGGGACCAAAATCAAAAGTGCCCCCAAGTACACAAGTTAAGAAAGGAGAGGAGACTGAA
GAGACAAGTTCAAGTAAATTGTTGGTAAAAGCAGAAGAGCTAGAGAAACCTAAAGAAACAGAAAAAGTTA
AAATCACCAAGGTGTTTGATTTTGCTGGTGAAGAAGTAAGGGTAACTAAGGAAGTGGATGCTACATCTAA
AGAGGCCAAATCCTTCTTCAAGCAGAATGAGAAAGAAAAACCACAGGCTAATGTTCCTTCAGCTCTGCCA
TCACTCCCTGCCGGGTCAGGGTTAAAAAGATCAAGTGGCATGAGCAGCCTTTTGGGGAAAATTGGTGCCA
AGAAGCAGAAAATGAGCACCCTTGAGAAGTCCAAACTGGACTGGGAGAGCTTCAAGGAGGAAGAGGGGAT
TGGTGAAGAACTGGCCATCCATAATCGAGGGAAAGAGGGGTACATTGAACGGAAAGCCTTCCTTGACCGA
GTGGATCACAGGCAGTTTGAAATTGAGCGAGATCTCAGGCTGAGCAAAATGAAACCTTGA

Translation (299 aa):
MEEFDSEDFSTSEEDEDYVPSGGEYSEDDVNELVKEDEVDGEEQTQKTQGKKRKAQSIPARKRRQGGLSL
EEEEEEDANSESEGSSSEEEDDAAEQEKGIGSEDARKKKEDELWASFLNDVGPKSKVPPSTQVKKGEETE
ETSSSKLLVKAEELEKPKETEKVKITKVFDFAGEEVRVTKEVDATSKEAKSFFKQNEKEKPQANVPSALP
SLPAGSGLKRSSGMSSLLGKIGAKKQKMSTLEKSKLDWESFKEEEGIGEELAIHNRGKEGYIERKAFLDR
VDHRQFEIERDLRLSKMKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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