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Report for CCDS82563.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82563.1 Public Homo sapiens 2 METTL21A 24 110 108 CCDS HistoryNCBI Gene:151194Re-query CCDS DB by CCDS ID:82563.1Re-query CCDS DB by GeneID:151194See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82563.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272839.7 ENSP00000272839.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000272839.7Link to Ensembl Protein Viewer:ENSP00000272839.3Re-query CCDS DB by Nucleotide ID:ENST00000272839Re-query CCDS DB by Protein ID:ENSP00000272839
Original member Current member NCBI NM_001330137.2 NP_001317066.1 Accepted alive Link to Nucleotide Sequence:NM_001330137.2Link to Protein Sequence:NP_001317066.1Re-query CCDS DB by Nucleotide ID:NM_001330137Re-query CCDS DB by Protein ID:NP_001317066Link to BLAST:NP_001317066.1

Chromosomal Locations for CCDS 82563.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 207613046 207613443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207620641 207620694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207621806 207621917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 207624229 207624375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (711 nt):
ATGGCCCTCGTGCCCTATGAGGAGACCACGGAATTTGGGTTGCAGAAATTCCACAAGCCTCTTGCAACTT
TTTCCTTTGCAAACCACACGATCCAGATCCGGCAGGACTGGAGACACCTGGGAGTCGCAGCGGTGGTTTG
GGATGCGGCCATCGTTCTTTCCACATACCTGGAGATGGGAGCTGTGGAGCTCAGGGGCCGCTCTGCCGTG
GAGCTGGGTGCTGGCACGGGGCTGGTGGGCATAGTGGCTGCCCTGCTGGCACTTAAGTCATCGATGAAGC
CCTTGCTGGTACACTGCCTTTTATTCTTTTCAGGTGCTCATGTGACTATCACGGATCGAAAAGTAGCATT
AGAATTTCTTAAATCAAACGTTCAAGCCAACTTACCTCCTCATATCCAAACTAAAACTGTTGTTAAGGAG
CTGACTTGGGGACAAAATTTGGGGAGTTTTTCTCCTGGAGAATTTGACCTGATACTTGGTGCTGATATCA
TATATTTAGAAGAAACATTCACAGATCTTCTTCAGACACTGGAACATCTCTGTAGCAATCACTCTGTGAT
TCTTTTAGCATGCCGAATTCGCTATGAACGGGATAACAACTTCTTAGCAATGCTGGAGAGGCAATTTACT
GTGAGAAAGGTTCACTACGATCCTGAAAAAGATGTACATATTTACGAAGCACAGAAGAGAAACCAGAAGG
AGGACTTATAA

Translation (236 aa):
MALVPYEETTEFGLQKFHKPLATFSFANHTIQIRQDWRHLGVAAVVWDAAIVLSTYLEMGAVELRGRSAV
ELGAGTGLVGIVAALLALKSSMKPLLVHCLLFFSGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKE
LTWGQNLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLAMLERQFT
VRKVHYDPEKDVHIYEAQKRNQKEDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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