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Report for CCDS7661.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7661.1 Public Homo sapiens 10 GLRX3 24 110 108 CCDS HistoryNCBI Gene:10539Re-query CCDS DB by CCDS ID:7661.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7661.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331244.10 ENSP00000330836.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331244.10Link to Ensembl Protein Viewer:ENSP00000330836.5Re-query CCDS DB by Nucleotide ID:ENST00000331244Re-query CCDS DB by Protein ID:ENSP00000330836
Original member Current member EBI ENST00000368644.5 ENSP00000357633.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368644.5Link to Ensembl Protein Viewer:ENSP00000357633.1Re-query CCDS DB by Nucleotide ID:ENST00000368644Re-query CCDS DB by Protein ID:ENSP00000357633
Original member Current member EBI ENST00000481034.1 ENSP00000435445.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000481034.1Link to Ensembl Protein Viewer:ENSP00000435445.1Re-query CCDS DB by Nucleotide ID:ENST00000481034Re-query CCDS DB by Protein ID:ENSP00000435445
Original member Current member NCBI NM_001199868.2 NP_001186797.1 Accepted alive Link to Nucleotide Sequence:NM_001199868.2Link to Protein Sequence:NP_001186797.1Re-query CCDS DB by Nucleotide ID:NM_001199868Re-query CCDS DB by Protein ID:NP_001186797Link to BLAST:NP_001186797.1
Original member Current member NCBI NM_006541.5 NP_006532.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006541.5Link to Protein Sequence:NP_006532.2Re-query CCDS DB by Nucleotide ID:NM_006541Re-query CCDS DB by Protein ID:NP_006532Link to BLAST:NP_006532.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186797.1 335 O76003 335 100% 0 0
NP_006532.2 335 O76003 335 100% 0 0

Chromosomal Locations for CCDS 7661.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 130136421 130136512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 130145211 130145319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 130159995 130160069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 130160796 130160997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 130166507 130166679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 130166919 130166980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 130169433 130169490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 130171584 130171636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 130174867 130174906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 130174997 130175089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 130179342 130179392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1008 nt):
ATGGCGGCGGGGGCGGCTGAGGCAGCTGTAGCGGCCGTGGAGGAGGTCGGCTCAGCCGGGCAGTTTGAGG
AGCTGCTGCGCCTCAAAGCCAAGTCCCTCCTTGTGGTCCATTTCTGGGCACCATGGGCTCCACAGTGTGC
ACAGATGAACGAAGTTATGGCAGAGTTAGCTAAAGAACTCCCTCAAGTTTCATTTGTGAAGTTGGAAGCT
GAAGGTGTTCCTGAAGTATCTGAAAAATATGAAATTAGCTCTGTTCCCACTTTTCTGTTTTTCAAGAATT
CTCAGAAAATCGACCGATTAGATGGTGCACATGCCCCAGAGTTGACCAAAAAAGTTCAGCGACATGCATC
TAGTGGCTCCTTCCTACCCAGCGCTAATGAACATCTTAAAGAAGATCTCAACCTTCGCTTGAAGAAATTG
ACTCATGCTGCCCCCTGCATGCTGTTTATGAAAGGAACTCCTCAAGAACCACGCTGTGGTTTCAGCAAGC
AGATGGTGGAAATTCTTCACAAACATAATATTCAGTTTAGCAGTTTTGATATCTTCTCAGATGAAGAGGT
TCGACAGGGACTCAAAGCCTATTCCAGTTGGCCTACCTATCCTCAGCTCTATGTTTCTGGAGAGCTCATA
GGAGGACTTGATATAATTAAGGAGCTAGAAGCATCTGAAGAACTAGATACAATTTGTCCCAAAGCTCCCA
AATTAGAGGAAAGGCTCAAAGTGCTGACAAATAAAGCTTCTGTGATGCTCTTTATGAAAGGAAACAAACA
GGAAGCAAAATGTGGATTCAGCAAACAAATTCTGGAAATACTAAATAGTACTGGTGTTGAATATGAAACA
TTCGATATATTGGAGGATGAAGAAGTTCGGCAAGGATTAAAAGCTTACTCAAATTGGCCAACATACCCTC
AGCTGTATGTGAAAGGGGAGCTGGTGGGAGGATTGGATATTGTGAAGGAACTGAAAGAAAATGGTGAATT
GCTGCCTATACTGAGAGGAGAAAATTAA

Translation (335 aa):
MAAGAAEAAVAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEA
EGVPEVSEKYEISSVPTFLFFKNSQKIDRLDGAHAPELTKKVQRHASSGSFLPSANEHLKEDLNLRLKKL
THAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLYVSGELI
GGLDIIKELEASEELDTICPKAPKLEERLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYET
FDILEDEEVRQGLKAYSNWPTYPQLYVKGELVGGLDIVKELKENGELLPILRGEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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