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Report for CCDS81511.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81511.1 Public Homo sapiens 10 HSPA12A 24 110 108 CCDS HistoryNCBI Gene:259217Re-query CCDS DB by CCDS ID:81511.1Re-query CCDS DB by GeneID:259217See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81511.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000635765.1 ENSP00000489674.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000635765.1Link to Ensembl Protein Viewer:ENSP00000489674.1Re-query CCDS DB by Nucleotide ID:ENST00000635765Re-query CCDS DB by Protein ID:ENSP00000489674
Original member Current member NCBI NM_001330164.2 NP_001317093.1 Accepted alive Link to Nucleotide Sequence:NM_001330164.2Link to Protein Sequence:NP_001317093.1Re-query CCDS DB by Nucleotide ID:NM_001330164Re-query CCDS DB by Protein ID:NP_001317093Link to BLAST:NP_001317093.1

Chromosomal Locations for CCDS 81511.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 116674781 116675418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 116676399 116676502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 116679503 116679761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 116681152 116681256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 116681791 116681877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 116683791 116683962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 116692351 116692467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 116698635 116698739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 116700943 116701129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 116705151 116705278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 116707200 116707285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 116834935 116835022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 116849566 116849568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2079 nt):
ATGATGGAGAGTGTTGGCGTGTACGGATTCTGTGGGTGTAAAGCAAAGAACAAAATGAAGTGTGATTCAA
GGTGGGAAATAGCCGCTTCAGAAACGGCTCCCACATCTGCATATTCATCTCCAGCCCGGAGTCTTGGGGA
CACAGGAATAACGCCTCTGTCCCCCTCCCATATTGTGAACGACACTGACTCCAACGTCTCAGAACAGCAG
TCATTTCTCGTGGTGGTGGCCGTCGACTTTGGGACCACATCCAGTGGCTATGCCTACAGCTTCACCAAGG
AGCCGGAATGCATCCATGTGATGAGGCGATGGGAGGGAGGTGACCCTGGTGTGTCCAATCAGAAGACTCC
AACCACCATCTTGCTGACTCCCGAGAGGAAGTTCCACAGCTTCGGGTATGCCGCCAGGGACTTTTACCAT
GACCTGGATCCCAATGAGGCCAAGCAGTGGCTGTACCTGGAGAAGTTCAAGATGAAGCTGCACACCACTG
GGGACCTCACCATGGATACAGACCTGACGGCAGCAAATGGCAAGAAAGTCAAAGCCCTTGAAATCTTTGC
TTATGCCCTGCAGTACTTTAAGGAGCAGGCGCTGAAGGAGCTGAGTGACCAGGCGGGTTCGGAGTTCGAG
AACTCTGATGTCAGATGGGTCATCACGGTGCCTGCCATCTGGAAGCAGCCGGCCAAGCAGTTCATGAGAC
AAGCTGCCTACCAGGCAGGCCTGGCCTCCCCCGAGAACTCGGAGCAGCTCATCATTGCCTTGGAGCCTGA
GGCAGCCTCTATCTACTGCCGAAAGCTGCGGCTACACCAGATGATTGAGCTGAGCAGCAAGGCAGCCGTC
AATGGGTACAGCGGCAGTGACACAGTAGGAGCTGGGTTTACACAGGCTAAGGAACACATACGGCGTAATC
GGCAGAGTCGGACCTTTTTGGTGGAGAATGTCATAGGAGAAATCTGGTCCGAGCTGGAGGAAGGTGATAA
GTATGTGGTTGTGGACAGTGGCGGTGGCACCGTAGACCTGACAGTCCATCAGATCCGGTTACCGGAGGGA
CACCTTAAGGAACTGTATAAAGCAACAGGCGGACCCTATGGATCTTTAGGAGTAGATTATGAGTTCGAAA
AACTTCTGTATAAAATATTTGGAGAGGATTTTATTGAACAATTCAAAATCAAACGCCCTGCAGCCTGGGT
TGACTTAATGATTGCGTTTGAGTCTCGCAAAAGGGCGGCTGCCCCAGACAGAACTAACCCGCTGAACATC
ACCCTGCCCTTCTCCTTCATTGACTACTACAAGAAGTTCCGCGGGCACAGTGTGGAGCACGCCTTGCGGA
AAAGCAATGTGGATTTTGTGAAGTGGTCCTCGCAGGGGATGCTGCGGATGAGTCCAGATGCCATGAACGC
CCTTTTTAAGCCGACCATCGATAGCATCATTGAGCATCTCCGGGACCTGTTTCAGAAGCCCGAGGTGTCC
ACCGTCAAGTTCCTCTTTCTGGTGGGCGGCTTTGCCGAGGCGCCCCTGCTGCAGCAGGCGGTGCAGGCTG
CTTTTGGGGACCAGTGCCGGATCATCATCCCCCAGGACGTGGGCCTCACCATCCTCAAGGGTGCCGTCCT
CTTTGGCCTGGACCCCGCGGTCATCAAGGTGCGCCGGTCGCCGCTCACCTACGGGGTAGGCGTGCTGAAC
CGCTACGTGGAGGGCAAGCACCCGCCTGAGAAGCTGCTGGTGAAGGATGGCACTCGGTGGTGCACCGACG
TCTTTGACAAGTTCATCTCTGCCGACCAGTCTGTGGCTCTGGGTGAGCTGGTCAAGCGTAGCTACACCCC
GGCCAAGCCCTCCCAGCTGGTCATTGTCATCAACATCTACAGCTCTGAGCACGACAACGTCAGCTTCATC
ACTGATCCCGGGGTGAAGAAGTGTGGCACGCTCCGCCTGGATCTCACAGGGACCAGTGGCACTGCGGTGC
CCGCCCGGAGGGAGATCCAGACCCTTATGCAGTTCGGGGACACCGAGATCAAAGCCACAGCCATTGATAT
AGCCACTTCGAAGAGTGTCAAAGTTGGGATCGACTTCTTAAATTACTAA

Translation (692 aa):
MMESVGVYGFCGCKAKNKMKCDSRWEIAASETAPTSAYSSPARSLGDTGITPLSPSHIVNDTDSNVSEQQ
SFLVVVAVDFGTTSSGYAYSFTKEPECIHVMRRWEGGDPGVSNQKTPTTILLTPERKFHSFGYAARDFYH
DLDPNEAKQWLYLEKFKMKLHTTGDLTMDTDLTAANGKKVKALEIFAYALQYFKEQALKELSDQAGSEFE
NSDVRWVITVPAIWKQPAKQFMRQAAYQAGLASPENSEQLIIALEPEAASIYCRKLRLHQMIELSSKAAV
NGYSGSDTVGAGFTQAKEHIRRNRQSRTFLVENVIGEIWSELEEGDKYVVVDSGGGTVDLTVHQIRLPEG
HLKELYKATGGPYGSLGVDYEFEKLLYKIFGEDFIEQFKIKRPAAWVDLMIAFESRKRAAAPDRTNPLNI
TLPFSFIDYYKKFRGHSVEHALRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDSIIEHLRDLFQKPEVS
TVKFLFLVGGFAEAPLLQQAVQAAFGDQCRIIIPQDVGLTILKGAVLFGLDPAVIKVRRSPLTYGVGVLN
RYVEGKHPPEKLLVKDGTRWCTDVFDKFISADQSVALGELVKRSYTPAKPSQLVIVINIYSSEHDNVSFI
TDPGVKKCGTLRLDLTGTSGTAVPARREIQTLMQFGDTEIKATAIDIATSKSVKVGIDFLNY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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