NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS43239.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43239.1 Public Homo sapiens 4 NAAA 24 110 108 CCDS HistoryNCBI Gene:27163Re-query CCDS DB by CCDS ID:43239.1Re-query CCDS DB by GeneID:27163See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43239.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286733.9 ENSP00000286733.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000286733.9Link to Ensembl Protein Viewer:ENSP00000286733.4Re-query CCDS DB by Nucleotide ID:ENST00000286733Re-query CCDS DB by Protein ID:ENSP00000286733
Original member Current member NCBI NM_014435.4 NP_055250.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014435.4Link to Protein Sequence:NP_055250.2Re-query CCDS DB by Nucleotide ID:NM_014435Re-query CCDS DB by Protein ID:NP_055250Link to BLAST:NP_055250.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055250.2 359 Q02083-1 359 100% 0 0

Chromosomal Locations for CCDS 43239.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 75914904 75914985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75918761 75918789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75919909 75919975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75920738 75920800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75920951 75921123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75925735 75925811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75931214 75931304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75936109 75936235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75940001 75940165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75940744 75940949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1080 nt):
ATGCGGACCGCGGACCGGGAGGCGCGCCCGGGGCTTCCGTCCCTGCTGCTGCTGCTGCTGGCCGGGGCCG
GGCTGTCAGCCGCCTCGCCCCCAGCAGCGCCGCGCTTCAACGTGAGCCTGGACTCGGTCCCCGAGCTGCG
CTGGCTGCCCGTGCTGCGGCACTACGACTTGGACTTGGTGCGCGCCGCGATGGCGCAAGTCATCGGGGAC
AGAGTCCCCAAGTGGGTGCACGTGTTAATCGGAAAAGTGGTCCTGGAGCTGGAGCGCTTCCTGCCCCAGC
CCTTCACCGGCGAGATCCGCGGCATGTGTGACTTCATGAACCTCAGCCTGGCGGACTGCCTTCTGGTCAA
CCTGGCCTACGAGTCCTCCGTGTTCTGCACCAGTATTGTGGCTCAAGACTCCAGAGGCCACATTTACCAT
GGTCGGAATTTGGATTATCCTTTTGGGAATGTCTTACGCAAGCTGACAGTGGATGTGCAATTCTTAAAGA
ATGGGCAGATTGCATTCACAGGAACTACTTTTATTGGCTATGTAGGATTATGGACTGGCCAGAGCCCACA
CAAGTTTACAGTTTCTGGTGATGAACGAGATAAAGGCTGGTGGTGGGAGAATGCTATCGCTGCCCTGTTT
CGGAGACACATTCCCGTCAGCTGGCTGATCCGCGCTACCCTGAGTGAGTCGGAAAACTTCGAAGCAGCTG
TTGGCAAGTTGGCCAAGACTCCCCTTATTGCTGATGTTTATTACATTGTTGGTGGCACGTCCCCCCGGGA
GGGGGTGGTCATCACGAGGAACAGAGATGGCCCAGCAGACATTTGGCCTCTAGATCCTTTGAATGGAGCG
TGGTTCCGAGTTGAGACAAATTACGACCACTGGAAGCCAGCACCCAAGGAAGATGACCGGAGAACATCTG
CCATCAAGGCCCTTAATGCTACAGGACAAGCAAACCTCAGCCTGGAGGCACTTTTCCAGATTTTGTCGGT
GGTTCCAGTTTATAACAACTTCACAATTTATACTACGGTAATGAGCGCCGGTAGCCCAGACAAGTACATG
ACTAGGATCAGAAACCCGAGTAGAAAGTAA

Translation (359 aa):
MRTADREARPGLPSLLLLLLAGAGLSAASPPAAPRFNVSLDSVPELRWLPVLRHYDLDLVRAAMAQVIGD
RVPKWVHVLIGKVVLELERFLPQPFTGEIRGMCDFMNLSLADCLLVNLAYESSVFCTSIVAQDSRGHIYH
GRNLDYPFGNVLRKLTVDVQFLKNGQIAFTGTTFIGYVGLWTGQSPHKFTVSGDERDKGWWWENAIAALF
RRHIPVSWLIRATLSESENFEAAVGKLAKTPLIADVYYIVGGTSPREGVVITRNRDGPADIWPLDPLNGA
WFRVETNYDHWKPAPKEDDRRTSAIKALNATGQANLSLEALFQILSVVPVYNNFTIYTTVMSAGSPDKYM
TRIRNPSRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH