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Report for CCDS5611.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5611.1 Public Homo sapiens 7 DBF4 24 110 108 CCDS HistoryNCBI Gene:10926Re-query CCDS DB by CCDS ID:5611.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5611.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000265728.6 ENSP00000265728.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000265728.6Link to Ensembl Protein Viewer:ENSP00000265728.1Re-query CCDS DB by Nucleotide ID:ENST00000265728Re-query CCDS DB by Protein ID:ENSP00000265728
Original member Current member NCBI NM_006716.4 NP_006707.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006716.4Link to Protein Sequence:NP_006707.1Re-query CCDS DB by Nucleotide ID:NM_006716Re-query CCDS DB by Protein ID:NP_006707Link to BLAST:NP_006707.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006707.1 674 Q9UBU7-1 674 100% 0 0

Chromosomal Locations for CCDS 5611.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 87876733 87876778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87878053 87878225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87884979 87885158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87886844 87886894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87887329 87887398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87887983 87888059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87896474 87896510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87897294 87897339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87900221 87900349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87900764 87900878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87904292 87904416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87907188 87908163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2025 nt):
ATGAACTCCGGAGCCATGAGGATCCACAGTAAAGGACATTTCCAGGGTGGAATCCAAGTCAAAAATGAAA
AAAACAGACCATCTCTGAAATCTCTGAAAACTGATAACAGGCCAGAAAAATCCAAATGTAAGCCACTTTG
GGGAAAAGTATTTTACCTTGACTTACCTTCTGTCACCATATCTGAAAAACTTCAAAAGGACATTAAGGAT
CTGGGAGGGCGAGTTGAAGAATTTCTCAGCAAAGATATCAGTTATCTTATTTCAAATAAGAAGGAAGCTA
AATTTGCACAAACCTTGGGTCGAATTTCTCCTGTACCAAGTCCAGAATCTGCATATACTGCAGAAACCAC
TTCACCTCATCCCAGCCATGATGGAAGTTCATTTAAGTCACCAGACACAGTGTGTTTAAGCAGAGGAAAA
TTATTAGTTGAAAAAGCTATCAAGGACCATGATTTTATTCCTTCAAATAGTATATTATCAAATGCCTTGT
CATGGGGAGTAAAAATTCTTCATATTGATGACATTAGATACTACATTGAACAAAAGAAAAAAGAGTTGTA
TTTACTCAAGAAATCAAGTACTTCAGTAAGAGATGGGGGCAAAAGAGTTGGTAGTGGTGCACAAAAAACA
AGAACAGGAAGACTCAAAAAGCCTTTTGTAAAGGTGGAAGATATGAGCCAACTTTATAGGCCATTTTATC
TTCAGCTGACCAATATGCCTTTTATAAATTATTCTATTCAGAAGCCCTGCAGTCCATTTGATGTAGACAA
GCCATCTAGTATGCAAAAGCAAACTCAGGTTAAACTAAGAATCCAAACAGATGGCGATAAGTATGGTGGA
ACCTCAATTCAACTCCAGTTGAAAGAGAAGAAGAAAAAAGGATATTGTGAATGTTGCTTGCAGAAATATG
AAGATCTAGAAACTCACCTTCTAAGTGAGCAACACAGAAACTTTGCACAGAGTAACCAGTATCAAGTTGT
TGATGATATTGTATCTAAGTTAGTTTTTGACTTTGTGGAATATGAAAAGGACACACCTAAAAAGAAAAGA
ATAAAATACAGTGTTGGATCCCTTTCTCCTGTTTCTGCAAGTGTCCTGAAAAAGACTGAACAAAAGGAAA
AAGTGGAATTGCAACATATTTCTCAGAAAGATTGCCAGGAAGATGATACAACAGTGAAGGAGCAGAATTT
CCTGTATAAAGAGACCCAGGAAACTGAAAAAAAGCTCCTGTTTATTTCAGAGCCCATCCCCCACCCTTCA
AATGAATTGAGAGGGCTTAATGAGAAAATGAGTAATAAATGTTCCATGTTAAGTACAGCTGAAGATGACA
TAAGACAGAATTTTACACAGCTACCTCTACATAAAAACAAACAGGAATGCATTCTTGACATTTCCGAACA
CACATTAAGTGAAAATGACTTAGAAGAACTAAGGGTAGATCACTATAAATGTAACATACAGGCATCTGTA
CATGTTTCTGATTTCAGTACAGATAATAGTGGATCTCAACCAAAACAGAAGTCAGATACTGTGCTTTTTC
CAGCAAAGGATCTCAAGGAAAAGGACCTTCATTCAATATTTACTCATGATTCTGGTCTGATAACAATAAA
CAGTTCACAAGAGCACCTAACTGTTCAGGCAAAGGCTCCATTCCATACTCCTCCTGAGGAACCCAATGAA
TGTGACTTCAAGAATATGGATAGTTTACCTTCTGGTAAAATACATCGAAAAGTGAAAATAATATTAGGAC
GAAATAGAAAAGAAAATCTGGAACCAAATGCTGAATTTGATAAAAGAACTGAATTTATTACACAAGAAGA
AAACAGAATTTGTAGTTCACCGGTACAGTCTTTACTAGACTTGTTTCAGACTAGTGAAGAGAAATCAGAA
TTTTTGGGTTTCACAAGCTACACAGAAAAGAGTGGTATATGCAATGTTTTAGATATTTGGGAAGAGGAAA
ATTCAGATAATCTGTTAACAGCGTTTTTCTCGTCCCCTTCAACTTCTACATTTACTGGCTTTTAG

Translation (674 aa):
MNSGAMRIHSKGHFQGGIQVKNEKNRPSLKSLKTDNRPEKSKCKPLWGKVFYLDLPSVTISEKLQKDIKD
LGGRVEEFLSKDISYLISNKKEAKFAQTLGRISPVPSPESAYTAETTSPHPSHDGSSFKSPDTVCLSRGK
LLVEKAIKDHDFIPSNSILSNALSWGVKILHIDDIRYYIEQKKKELYLLKKSSTSVRDGGKRVGSGAQKT
RTGRLKKPFVKVEDMSQLYRPFYLQLTNMPFINYSIQKPCSPFDVDKPSSMQKQTQVKLRIQTDGDKYGG
TSIQLQLKEKKKKGYCECCLQKYEDLETHLLSEQHRNFAQSNQYQVVDDIVSKLVFDFVEYEKDTPKKKR
IKYSVGSLSPVSASVLKKTEQKEKVELQHISQKDCQEDDTTVKEQNFLYKETQETEKKLLFISEPIPHPS
NELRGLNEKMSNKCSMLSTAEDDIRQNFTQLPLHKNKQECILDISEHTLSENDLEELRVDHYKCNIQASV
HVSDFSTDNSGSQPKQKSDTVLFPAKDLKEKDLHSIFTHDSGLITINSSQEHLTVQAKAPFHTPPEEPNE
CDFKNMDSLPSGKIHRKVKIILGRNRKENLEPNAEFDKRTEFITQEENRICSSPVQSLLDLFQTSEEKSE
FLGFTSYTEKSGICNVLDIWEEENSDNLLTAFFSSPSTSTFTGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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