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Report for CCDS43118.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43118.1 Public Homo sapiens 3 FILIP1L 24 110 108 CCDS HistoryNCBI Gene:11259Re-query CCDS DB by CCDS ID:43118.1Re-query CCDS DB by GeneID:11259See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43118.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331335.9 ENSP00000327880.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000331335.9Link to Ensembl Protein Viewer:ENSP00000327880.5Re-query CCDS DB by Nucleotide ID:ENST00000331335Re-query CCDS DB by Protein ID:ENSP00000327880
Original member Current member NCBI NM_001042459.3 NP_001035924.1 Accepted alive Link to Nucleotide Sequence:NM_001042459.3Link to Protein Sequence:NP_001035924.1Re-query CCDS DB by Nucleotide ID:NM_001042459Re-query CCDS DB by Protein ID:NP_001035924Link to BLAST:NP_001035924.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035924.1 1133 Q4L180-2 1133 100% 0 0

Chromosomal Locations for CCDS 43118.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 99848274 99851070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 99924230 99924408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 99929856 99930029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 99930769 99931020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3402 nt):
ATGCGTTCCAGAGGCAGTGATACCGAGGGCTCAGCCCAAAAGAAATTTCCAAGACATACTAAAGGCCACA
GT
TTCCAAGGGCCTAAAAACATGAAGCATAGACAGCAAGACAAAGACTCCCCCAGTGAGTCGGATGTAAT
A
CTTCCGTGTCCCAAGGCAGAGAAGCCACACAGTGGTAATGGCCACCAAGCAGAAGACCTCTCAAGAGAT
GAC
CTGTTATTTCTCCTCAGCATTCTGGAGGGAGAACTGCAGGCTCGAGATGAGGTCATAGGCATTTTAA
AG
GCTGAAAAAATGGACCTGGCTTTGCTGGAAGCTCAGTATGGGTTTGTCACTCCAAAAAAGGTGTTAGA
G
GCTCTCCAGAGAGATGCTTTTCAAGCGAAATCTACCCCTTGGCAGGAGGACATCTATGAGAAACCAATG
AAT
GAGTTGGACAAAGTTGTGGAAAAACATAAAGAATCTTACAGACGAATCCTGGGACAGCTTTTAGTGG
CA
GAAAAATCCCGTAGGCAAACCATATTGGAGTTGGAGGAAGAAAAGAGAAAACATAAAGAATACATGGA
G
AAGAGTGATGAATTCATATGCCTACTAGAACAGGAATGTGAAAGATTAAAGAAGCTAATTGATCAAGAA
ATC
AAGTCTCAGGAGGAGAAGGAGCAAGAAAAGGAGAAAAGGGTCACCACCCTGAAAGAGGAGCTGACCA
AG
CTGAAGTCTTTTGCTTTGATGGTGGTGGATGAACAGCAAAGGCTGACGGCACAGCTCACCCTTCAAAG
A
CAGAAAATCCAAGAGCTGACCACAAATGCAAAGGAAACACATACCAAACTAGCCCTTGCTGAAGCCAGA
GTT
CAGGAGGAAGAGCAGAAGGCAACCAGACTAGAGAAGGAACTGCAAACGCAGACCACAAAGTTTCACC
AA
GACCAAGACACAATTATGGCGAAGCTCACCAATGAGGACAGTCAAAATCGCCAGCTTCAACAAAAGCT
G
GCAGCACTCAGCCGGCAGATTGATGAGTTAGAAGAGACAAACAGGTCTTTACGAAAAGCAGAAGAGGAG
CTG
CAAGATATAAAAGAAAAAATCAGTAAGGGAGAATATGGAAACGCTGGTATCATGGCTGAAGTGGAAG
AG
CTCAGGAAACGTGTGCTAGATATGGAAGGGAAAGATGAAGAGCTCATAAAAATGGAGGAGCAGTGCAG
A
GATCTCAATAAGAGGCTTGAAAGGGAGACGTTACAGAGTAAAGACTTTAAACTAGAGGTTGAAAAACTC
AGT
AAAAGAATTATGGCTCTGGAAAAGTTAGAAGACGCTTTCAACAAAAGCAAACAAGAATGCTACTCTC
TG
AAATGCAATTTAGAAAAAGAAAGGATGACCACAAAGCAGTTGTCTCAAGAACTGGAGAGTTTAAAAGT
A
AGGATCAAAGAGCTAGAAGCCATTGAAAGTCGGCTAGAAAAGACAGAATTCACTCTAAAAGAGGATTTA
ACT
AAACTGAAAACATTAACTGTGATGTTTGTAGATGAACGGAAAACAATGAGTGAAAAATTAAAGAAAA
CT
GAAGATAAATTACAAGCTGCTTCTTCTCAGCTTCAAGTGGAGCAAAATAAAGTAACAACAGTTACTGA
G
AAGTTAATTGAGGAAACTAAAAGGGCGCTCAAGTCCAAAACCGATGTAGAAGAAAAGATGTACAGCGTA
ACC
AAGGAGAGAGATGATTTAAAAAACAAATTGAAAGCGGAAGAAGAGAAAGGAAATGATCTCCTGTCAA
GA
GTTAATATGTTGAAAAATAGGCTTCAATCATTGGAAGCAATTGAGAAAGATTTCCTAAAAAACAAATT
A
AATCAAGACTCTGGGAAATCCACAACAGCATTACACCAAGAAAACAATAAGATTAAGGAGCTCTCTCAA
GAA
GTGGAAAGACTGAAACTGAAGCTAAAGGACATGAAAGCCATTGAGGATGACCTCATGAAAACAGAAG
AT
GAATATGAGACTCTAGAACGAAGGTATGCTAATGAACGAGACAAAGCTCAATTTTTATCTAAAGAGCT
A
GAACATGTTAAAATGGAACTTGCTAAGTACAAGTTAGCAGAAAAGACAGAGACCAGCCATGAACAATGG
CTT
TTCAAAAGGCTTCAAGAAGAAGAAGCTAAGTCAGGGCACCTCTCAAGAGAAGTGGATGCATTAAAAG
AG
AAAATTCATGAATACATGGCAACTGAAGACCTAATATGTCACCTCCAGGGAGATCACTCAGTCCTGCA
A
AAAAAACTAAATCAACAAGAAAACAGGAACAGAGATTTAGGAAGAGAGATTGAAAACCTCACTAAGGAG
TTA
GAGAGGTACCGGCATTTCAGTAAGAGCCTCAGGCCTAGTCTCAATGGAAGAAGAATTTCCGATCCTC
AA
GTATTTTCTAAAGAAGTTCAGACAGAAGCAGTAGACAATGAACCACCTGATTACAAGAGCCTCATTCC
T
CTGGAACGTGCAGTCATCAATGGTCAGTTATATGAGGAGAGTGAGAATCAAGACGAGGACCCTAATGAT
GAG
GGATCTGTGCTGTCCTTCAAATGCAGCCAGTCTACTCCATGTCCTGTTAACAGAAAGCTATGGATTC
CC
TGGATGAAATCCAAGGAGGGCCATCTTCAGAATGGAAAAATGCAAACTAAACCCAATGCCAACTTTGT
G
CAACCTGGAGATCTAGTCCTAAGCCACACACCTGGGCAGCCACTTCATATAAAGGTTACTCCAGACCAT
GTA
CAAAACACAGCCACTCTTGAAATCACAAGTCCAACCACAGAGAGTCCTCACTCTTACACGAGTACTG
CA
GTGATACCGAACTGTGGCACGCCAAAGCAAAGGATAACCATCCTCCAAAACGCCTCCATAACACCAGT
A
AAGTCCAAAACCTCTACCGAAGACCTCATGAATTTAGAACAAGGCATGTCCCCAATTACCATGGCAACC
TTT
GCCAGAGCACAGACCCCAGAGTCTTGTGGTTCTCTAACTCCAGAAAGGACAATGTCCCCTATTCAGG
TT
TTGGCTGTGACTGGTTCAGCTAGCTCTCCTGAGCAGGGACGCTCCCCAGAACCAACAGAAATCAGTGC
C
AAGCATGCGATATTCAGAGTCTCCCCAGACCGGCAGTCATCATGGCAGTTTCAGCGTTCAAACAGCAAT
AGC
TCAAGTGTGATAACTACTGAGGATAATAAAATCCACATTCACTTAGGAAGTCCTTACATGCAAGCTG
TA
GCCAGCCCTGTGAGACCTGCCAGCCCTTCAGCACCACTGCAGGATAACCGAACTCAAGGCTTAATTAA
C
GGGGCACTAAACAAAACAACCAATAAAGTCACCAGCAGTATTACTATCACACCAACAGCCACACCTCTT
CCT
CGACAATCACAAATTACAGTAAGTAATATATATAACTGA


Translation (1133 aa):
MRSRGSDTEGSAQKKFPRHTKGHSFQGPKNMKHRQQDKDSPSESDVILPCPKAEKPHSGNGHQAEDLSRD
D
LLFLLSILEGELQ
ARDEVIGILKAEKMDLALLEAQYGFVTPKKVLEALQRDAFQAKSTPWQEDIYEKPM
N
E
LDKVVEKHKESYRRILGQLLVAEKSRRQTILELEEEKRKHKEYMEKSDEFICLLEQECERLKKLIDQE
I
KSQEEKEQEKEKRVTTLKEELTKLKSFALMVVDEQQRLTAQLTLQRQKIQELTTNAKETHTKLALAEAR
V
QEEEQKATRLEKELQTQTTKFHQDQDTIMAKLTNEDSQNRQLQQKLAALSRQIDELEETNRSLRKAEEE
L
QDIKEKISKGEYGNAGIMAEVEELRKRVLDMEGKDEELIKMEEQCRDLNKRLERETLQSKDFKLEVEKL
S
KRIMALEKLEDAFNKSKQECYSLKCNLEKERMTTKQLSQELESLKVRIKELEAIESRLEKTEFTLKEDL
T
KLKTLTVMFVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTTVTEKLIEETKRALKSKTDVEEKMYSV
T
KERDDLKNKLKAEEEKGNDLLSRVNMLKNRLQSLEAIEKDFLKNKLNQDSGKSTTALHQENNKIKELSQ
E
VERLKLKLKDMKAIEDDLMKTEDEYETLERRYANERDKAQFLSKELEHVKMELAKYKLAEKTETSHEQW
L
FKRLQEEEAKSGHLSREVDALKEKIHEYMATEDLICHLQGDHSVLQKKLNQQENRNRDLGREIENLTKE
L
ERYRHFSKSLRPSLNGRRISDPQVFSKEVQTEAVDNEPPDYKSLIPLERAVINGQLYEESENQDEDPND
E
GSVLSFKCSQSTPCPVNRKLWIPWMKSKEGHLQNGKMQTKPNANFVQPGDLVLSHTPGQPLHIKVTPDH
V
QNTATLEITSPTTESPHSYTSTAVIPNCGTPKQRITILQNASITPVKSKTSTEDLMNLEQGMSPITMAT
F
ARAQTPESCGSLTPERTMSPIQVLAVTGSASSPEQGRSPEPTEISAKHAIFRVSPDRQSSWQFQRSNSN
S
SSVITTEDNKIHIHLGSPYMQAVASPVRPASPSAPLQDNRTQGLINGALNKTTNKVTSSITITPTATPL
P
RQSQITVSNIYN




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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