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Report for CCDS40433.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40433.1 Public Mus musculus 8 Nudt21 23 108 98 CCDS HistoryNCBI Gene:68219Re-query CCDS DB by CCDS ID:40433.1Re-query CCDS DB by GeneID:68219See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40433.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034204.10 ENSMUSP00000034204.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034204.10Link to Ensembl Protein Viewer:ENSMUSP00000034204.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000034204Re-query CCDS DB by Protein ID:ENSMUSP00000034204
Original member Current member NCBI NM_026623.3 NP_080899.1 Accepted alive Link to Nucleotide Sequence:NM_026623.3Link to Protein Sequence:NP_080899.1Re-query CCDS DB by Nucleotide ID:NM_026623Re-query CCDS DB by Protein ID:NP_080899Link to BLAST:NP_080899.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080899.1 227 Q9CQF3 227 100% 0 0

Chromosomal Locations for CCDS 40433.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 94019683 94019704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94022775 94022889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94024542 94024617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94028835 94028924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94031144 94031207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94032302 94032502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 94036777 94036892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (684 nt):
ATGTCTGTGGTGCCGCCCAATCGCTCGCAGACGGGCTGGCCCCGGGGGGTCAACCAGTTCGGCAACAAGT
ACATCCAGCAGACCAAGCCCCTCACCCTGGAGCGCACCATTAATCTGTACCCGCTTACCAATTATACTTT
TGGTACAAAGGAGCCCCTCTATGAGAAGGACAGCTCTGTTGCAGCCAGATTTCAGCGCATGAGGGAGGAA
TTTGATAAGATTGGGATGAGAAGGACTGTAGAAGGGGTTCTGATTGTTCATGAACACCGCCTGCCCCACG
TGCTCCTGCTGCAGCTGGGGACAACTTTCTTCAAATTACCTGGTGGGGAACTTAACCCAGGAGAAGATGA
AGTTGAAGGACTAAAACGCTTAATGACAGAGATACTTGGTCGTCAAGATGGAGTCCTGCAAGACTGGGTC
ATTGATGACTGCATTGGGAACTGGTGGAGACCAAATTTTGAACCTCCTCAGTATCCGTATATTCCTGCAC
ATATAACAAAACCCAAGGAACATAAGAAGTTGTTTCTGGTTCAGCTTCAAGAGAAAGCCTTGTTTGCAGT
CCCTAAAAATTACAAGCTGGTAGCTGCACCATTGTTTGAGCTGTATGACAATGCACCGGGGTATGGACCC
ATCATTTCTAGTCTTCCTCAGCTGCTGAGCAGGTTCAATTTTATATACAACTGA

Translation (227 aa):
MSVVPPNRSQTGWPRGVNQFGNKYIQQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREE
FDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWV
IDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGP
IISSLPQLLSRFNFIYN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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