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Report for CCDS5528.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5528.2 Public Homo sapiens 7 ZNF273 24 110 108 CCDS HistoryNCBI Gene:10793Re-query CCDS DB by CCDS ID:5528.2Re-query CCDS DB by GeneID:10793See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 5528.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000476120.2 ENSP00000418719.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000476120.2Link to Ensembl Protein Viewer:ENSP00000418719.1Re-query CCDS DB by Nucleotide ID:ENST00000476120Re-query CCDS DB by Protein ID:ENSP00000418719
Original member Current member NCBI NM_021148.3 NP_066971.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021148.3Link to Protein Sequence:NP_066971.2Re-query CCDS DB by Nucleotide ID:NM_021148Re-query CCDS DB by Protein ID:NP_066971Link to BLAST:NP_066971.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066971.2 569 Q14593-1 569 100% 0 0

Chromosomal Locations for CCDS 5528.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 64903318 64903419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64917581 64917707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64918197 64918292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64927654 64929038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1710 nt):
ATGTCCTCTGCTCCTAGAGGTCCACCTTCTGTGGCCCCGTTACCTGCAGGTATTGGGAGATCCACAGCTA
AGACGCCAGGACTCCCTGGAAGCCTAGAAATGGGACCACTGACATTTAGGGATGTGGCCATAGAATTCTC
TCTGGAGGAGTGGCAATGCCTGGACACTTCACAGCAGAATTTGTATAGGAATGTGATGTTAGATAACTAC
AGAAACCTGGTCTTCCTGGGTATTGCTGTCTCTAAGCCAGACCTGATCACTTGTCTGGAGCAAGGAAAAG
AGCCCTGCAATATGAAGAGACATGCGATGGTAGCCAAACCCCCAGTTGTGTGTTCTCATTTTGCCCAAGA
CCTTTGGCCAAAGCAGGGCTTAAAAGATTCTTTTCAAAAAGTGATACTGAGAAGATATGGAAAATATGGA
CATGAGAATTTACAATTAAGAAAAGGCTGTAAAAGTGCGGATGAGCATAAGGTGCACAAAAGAGGTTATA
ATGGACTTAACCAATGTTTGACAACTACCCAGAGCAAAATATTTCAATGTGATAAATATGTTAAAGTCCT
TCATAAATTCTCAAATTCAAATATACATAAGAAAAGACAAACTGGAAAGAAACCTTTCAAATGTAAAGAA
TGTGGCAAATCATGTTGCATACTTTCACAACTAACTCAGCATAAGAAAACTGCTACTAGAGTGAATTTCT
ACAAATGTAAGACATGTGGAAAAGCCTTTAACCAGTTCTCAAATCTTACTAAACATAAGATAATTCATCC
TGAAGTGAATCCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTCCTTAACTCTTACTAAACAT
AAAAAAATTCATACTGAAGAGAAACCTTACAAATGTGAAGATTGTGGCAAAGTCTTTAGTGTATTTTCAG
TCCTTACTAAACATAAGATAATTCATACAGGAACAAAACCCTACAATTGTGAAGAATGTGGCAAAGGCTT
TAGTATATTCTCAACCCTTACTAAACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGCAATGAA
TGTGGTAAAGCCTTTAACTGGTCCTCAACTCTTACTAAACATAAGAGAATTCATACTGGAGAGAAACCCT
ACAAATGTGAAGAATGTGGCAAAGCTTTTAACCAGTCCTCAACCCTTACTAGACATAAGATAGTTCATAC
TGGAGAGAAACCCTACAAATGTGAAGAATGTGGTAAAGCCTTTAAACGGTCCACAACTCTTACTAAACAT
AAGAGAATTTATACTAAAGAGAAACCATACAAATGTGAAGAATGTGGAAAAGCCTTTAGTGTATTCTCAA
CCCTTACTAAACATAAGATAATTCATACTGGAGCAAAACCTTACAAATGTGAAGAATGTGGCAGTGCCTT
TAGGGCATTCTCAACCCTTACTGAACATAAGAGAGTTCATACTGGAGAGAAACCTTACAAATGCAATGAA
TGTGGTAAAGCCTTTAACTGGTCCTCAACTCTTACTAAACATAAGAGAATTCATACTGGAGAGAAGCCCT
ACAAATGTGAAGAATGTGGCAAAGCTTTTAACCGGTCCTCAAACCTTACTCGACATAAGAAAATTCATAC
TGGAGAGAAACCATACAAACCTAAAAGATGTGACAGTGCTTTTGACAACACCCCAAACTTTTCTAGACAT
AAAAGAAATCATATGGGTGAGAAATCCTAG

Translation (569 aa):
MSSAPRGPPSVAPLPAGIGRSTAKTPGLPGSLEMGPLTFRDVAIEFSLEEWQCLDTSQQNLYRNVMLDNY
RNLVFLGIAVSKPDLITCLEQGKEPCNMKRHAMVAKPPVVCSHFAQDLWPKQGLKDSFQKVILRRYGKYG
HENLQLRKGCKSADEHKVHKRGYNGLNQCLTTTQSKIFQCDKYVKVLHKFSNSNIHKKRQTGKKPFKCKE
CGKSCCILSQLTQHKKTATRVNFYKCKTCGKAFNQFSNLTKHKIIHPEVNPYKCEECGKAFNQSLTLTKH
KKIHTEEKPYKCEDCGKVFSVFSVLTKHKIIHTGTKPYNCEECGKGFSIFSTLTKHKIIHTGEKPYKCNE
CGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNQSSTLTRHKIVHTGEKPYKCEECGKAFKRSTTLTKH
KRIYTKEKPYKCEECGKAFSVFSTLTKHKIIHTGAKPYKCEECGSAFRAFSTLTEHKRVHTGEKPYKCNE
CGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNRSSNLTRHKKIHTGEKPYKPKRCDSAFDNTPNFSRH
KRNHMGEKS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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