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Report for CCDS3255.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3255.1 Public Homo sapiens 3 EEF1AKMT4 24 110 108 CCDS HistoryNCBI Gene:110599564Re-query CCDS DB by CCDS ID:3255.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3255.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324557.9 ENSP00000314295.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324557.9Link to Ensembl Protein Viewer:ENSP00000314295.5Re-query CCDS DB by Nucleotide ID:ENST00000324557Re-query CCDS DB by Protein ID:ENSP00000314295
Original member Current member NCBI NM_032331.4 NP_115707.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032331.4Link to Protein Sequence:NP_115707.2Re-query CCDS DB by Nucleotide ID:NM_032331Re-query CCDS DB by Protein ID:NP_115707Link to BLAST:NP_115707.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115707.2 255 P0DPD7 255 100% 0 0

Chromosomal Locations for CCDS 3255.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 184249695 184249890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184257473 184257756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 184258288 184258575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (768 nt):
ATGGCCTCTCCAGGGGCAGGTAGGGCGCCTCCGGAGTTACCGGAGCGGAACTGCGGGTACCGCGAAGTCG
AGTACTGGGATCAGCGCTACCAAGGCGCAGCCGATTCTGCCCCCTACGATTGGTTCGGGGACTTCTCCTC
CTTCCGTGCCCTCCTAGAGCCGGAGCTGCGGCCCGAGGACCGTATCCTTGTGCTAGGTTGCGGGAACAGT
GCCCTGAGCTACGAGCTGTTCCTCGGAGGCTTCCCTAATGTGACCAGTGTGGACTACTCATCAGTCGTGG
TGGCTGCCATGCAGGCTCGCCATGCCCATGTGCCGCAGCTGCGCTGGGAGACCATGGATGTGCGGAAGCT
GGACTTCCCCAGTGCTTCTTTTGATGTGGTGCTCGAGAAGGGCACGCTGGATGCCCTGCTGGCTGGGGAA
CGAGATCCCTGGACCGTGTCCTCTGAAGGTGTCCACACTGTGGACCAGGTGTTGAGTGAGGTGAGCCGCG
TGCTTGTCCCTGGAGGCCGGTTTATCTCAATGACTTCTGCTGCCCCCCACTTTCGGACCAGACACTATGC
CCAAGCCTATTATGGCTGGTCCCTGAGGCATGCTACCTATGGCAGCGGTTTCCACTTCCATCTCTACCTC
ATGCACAAGGGCGGGAAGCTCAGTGTGGCCCAGCTGGCTCTGGGGGCCCAAATCCTCTCACCCCCCAGAC
CTCCCACCTCACCTTGCTTCCTTCAGGACTCAGATCATGAGGACTTCCTTAGTGCCATTCAGCTCTGA

Translation (255 aa):
MASPGAGRAPPELPERNCGYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELRPEDRILVLGCGNS
ALSYELFLGGFPNVTSVDYSSVVVAAMQARHAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGE
RDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHFRTRHYAQAYYGWSLRHATYGSGFHFHLYL
MHKGGKLSVAQLALGAQILSPPRPPTSPCFLQDSDHEDFLSAIQL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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