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Report for CCDS7642.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7642.1 Public Homo sapiens 10 ZRANB1 24 110 108 CCDS HistoryNCBI Gene:54764Re-query CCDS DB by CCDS ID:7642.1Re-query CCDS DB by GeneID:54764See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7642.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359653.4 ENSP00000352676.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359653.4Link to Ensembl Protein Viewer:ENSP00000352676.4Re-query CCDS DB by Nucleotide ID:ENST00000359653Re-query CCDS DB by Protein ID:ENSP00000352676
Original member Current member NCBI NM_017580.3 NP_060050.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017580.3Link to Protein Sequence:NP_060050.2Re-query CCDS DB by Nucleotide ID:NM_017580Re-query CCDS DB by Protein ID:NP_060050Link to BLAST:NP_060050.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060050.2 708 Q9UGI0 708 100% 0 0

Chromosomal Locations for CCDS 7642.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 124942494 124943307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124966594 124966781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124971965 124972118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124973645 124973716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124974200 124974398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124981709 124981829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124983175 124983304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124983459 124983688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 124984774 124984992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2127 nt):
ATGTCAGAACGTGGAATTAAGTGGGCTTGTGAATATTGTACGTATGAAAACTGGCCATCTGCAATCAAGT
GTACTATGTGTCGTGCCCAAAGACCTAGTGGAACAATTATTACAGAAGATCCATTTAAAAGTGGTTCAAG
TGATGTTGGTAGAGATTGGGATCCTTCCAGCACCGAAGGAGGAAGTAGTCCTTTGATATGTCCAGACTCT
AGTGCAAGACCAAGGGTGAAATCTTCGTATAGCATGGAAAATGCAAATAAGTGGTCATGCCACATGTGTA
CATATTTGAACTGGCCAAGAGCAATCAGATGTACCCAGTGCTTATCCCAACGTAGGACCAGGAGTCCTAC
AGAATCTCCTCAGTCCTCAGGATCTGGCTCAAGACCAGTTGCTTTTTCTGTTGATCCTTGTGAGGAATAC
AATGATAGAAATAAACTGAACACTAGGACACAGCACTGGACTTGCTCTGTTTGCACATATGAAAACTGGG
CCAAGGCTAAAAGATGTGTTGTTTGTGATCATCCCAGACCTAATAACATTGAAGCAATAGAATTGGCAGA
GACTGAAGAGGCTTCTTCAATAATAAATGAGCAAGACAGAGCTCGATGGAGGGGAAGTTGCAGTAGTGGT
AATAGCCAAAGGAGATCACCTCCTGCTACGAAGCGGGACTCTGAAGTGAAAATGGATTTTCAGAGGATTG
AATTGGCTGGTGCTGTGGGAAGCAAGGAGGAACTTGAAGTAGACTTTAAAAAACTAAAGCAAATTAAAAA
CAGGATGAAAAAGACTGATTGGCTCTTCCTCAATGCTTGTGTGGGGGTTGTAGAAGGTGATTTAGCTGCC
ATAGAAGCATACAAGTCATCAGGAGGAGACATTGCACGTCAGCTCACCGCAGATGAAGTACGCTTGCTGA
ATCGTCCTTCTGCCTTTGATGTTGGCTATACTCTTGTACACTTGGCTATACGTTTTCAGAGGCAGGATAT
GCTAGCAATATTGCTTACAGAGGTGTCTCAACAAGCAGCAAAGTGTATTCCAGCAATGGTGTGTCCTGAA
CTGACAGAACAAATCCGGAGAGAGATAGCTGCCTCTCTTCATCAGAGAAAGGGGGATTTTGCTTGCTATT
TTCTGACTGACCTTGTAACATTTACATTGCCAGCAGATATTGAAGATTTGCCCCCAACAGTCCAAGAAAA
ATTATTTGATGAGGTGCTTGATAGAGACGTTCAAAAAGAATTAGAAGAAGAATCTCCAATTATTAACTGG
TCCTTGGAATTGGCTACACGTTTGGACAGTCGACTGTATGCACTTTGGAACCGGACTGCAGGAGACTGCC
TACTTGATTCAGTTCTACAAGCTACCTGGGGCATCTATGACAAGGACTCAGTGCTTCGGAAAGCCCTGCA
TGACAGCCTGCATGACTGTTCACATTGGTTTTACACACGCTGGAAAGATTGGGAATCATGGTATTCTCAG
AGCTTTGGTTTACATTTTTCCTTGAGAGAAGAACAGTGGCAAGAAGACTGGGCATTTATACTCTCTCTTG
CTAGTCAGCCTGGAGCAAGCTTGGAGCAGACGCACATTTTTGTACTGGCACATATTCTTAGACGACCAAT
TATAGTTTATGGAGTAAAATATTACAAGAGTTTCCGGGGAGAAACTTTAGGATATACTCGGTTTCAAGGT
GTTTATCTGCCTTTGTTGTGGGAACAGAGTTTTTGTTGGAAAAGTCCGATTGCTCTGGGTTATACGAGGG
GCCACTTCTCTGCTTTGGTTGCCATGGAAAATGATGGCTATGGCAACCGAGGTGCTGGTGCTAATCTCAA
TACCGATGATGATGTCACCATCACATTTTTGCCTCTGGTTGACAGTGAAAGGAAGCTACTCCATGTGCAC
TTCCTTTCTGCTCAGGAGCTAGGTAATGAGGAACAGCAAGAAAAACTGCTCAGGGAGTGGCTGGACTGCT
GTGTGACGGAGGGGGGAGTTCTGGTTGCCATGCAGAAGAGTTCTCGGCGGCGAAATCACCCCCTGGTCAC
TCAGATGGTAGAAAAATGGCTTGACCGCTACCGACAGATCCGGCCGTGTACATCCCTGTCTGATGGAGAG
GAAGATGAGGATGATGAAGATGAATGA

Translation (708 aa):
MSERGIKWACEYCTYENWPSAIKCTMCRAQRPSGTIITEDPFKSGSSDVGRDWDPSSTEGGSSPLICPDS
SARPRVKSSYSMENANKWSCHMCTYLNWPRAIRCTQCLSQRRTRSPTESPQSSGSGSRPVAFSVDPCEEY
NDRNKLNTRTQHWTCSVCTYENWAKAKRCVVCDHPRPNNIEAIELAETEEASSIINEQDRARWRGSCSSG
NSQRRSPPATKRDSEVKMDFQRIELAGAVGSKEELEVDFKKLKQIKNRMKKTDWLFLNACVGVVEGDLAA
IEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPE
LTEQIRREIAASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINW
SLELATRLDSRLYALWNRTAGDCLLDSVLQATWGIYDKDSVLRKALHDSLHDCSHWFYTRWKDWESWYSQ
SFGLHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQG
VYLPLLWEQSFCWKSPIALGYTRGHFSALVAMENDGYGNRGAGANLNTDDDVTITFLPLVDSERKLLHVH
FLSAQELGNEEQQEKLLREWLDCCVTEGGVLVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRPCTSLSDGE
EDEDDEDE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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