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Report for CCDS14097.3 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14097.3 Public Homo sapiens 22 KLHDC7B 24 110 108 CCDS HistoryNCBI Gene:113730Re-query CCDS DB by CCDS ID:14097.3See the combined annotation on chromosome 22 in Sequence Viewer

Public Note for CCDS 14097.2
The coding region has been updated to start at an alternate in-frame start codon that is more supported by conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 14097.3

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000648057.3 ENSP00000497256.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000648057.3Link to Ensembl Protein Viewer:ENSP00000497256.1Re-query CCDS DB by Nucleotide ID:ENST00000648057Re-query CCDS DB by Protein ID:ENSP00000497256
Original member Current member NCBI NM_138433.5 NP_612442.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138433.5Link to Protein Sequence:NP_612442.3Re-query CCDS DB by Nucleotide ID:NM_138433Re-query CCDS DB by Protein ID:NP_612442Link to BLAST:NP_612442.3

Chromosomal Locations for CCDS 14097.3

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 50546244 50549951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3708 nt):
ATGATCCAGGGCACCTTGGAGCCAGATGGTCCCCTCTGGGGCTGGGACTGGGACAGTGACAATGACTGGG
ATAGTGCTGTGCTGGCCCTCCTGGCGCTGGCTGTGGTGGCTGCCACAGCGCTGGCCTTACACTGGTTTGG
CTCCGGGCACGATCAAGAGGCGGCAGAACCGGTGTCCACAGCCCTCGGGGCTCAACCTCATCAGGCAGGA
GGAGCTGAGCTGGCCCTGCAACCGAAGTCTAAGGTCAGTGATGGCAGCGAGGGGCAGAGCCCAGGGCAGG
GGAAACCAGAGCCCCCAGGACGCGGCCAGCAGAGCCCTGTCCCTGCTGCAGCGCCGGGCGGGGGCCTGGC
CGCCATGGCCCGGCTTCCACTCAAGACGGCTGTCGAGGAGGCCCGCAGAGAGGCATTAGGACAGCAACGG
GGCAGTGCCACCCCCGCGGCCCCCCGAGCGGAAGGAAAGGAGCCTCCCAGGCCAGGCACTGCCCTCCTGG
GCAGGAGCGAAGCAGGGGGGATGTCCGCCCCCCTCCTGATCCACTTCACTCCTCGGAGCCCTGGCAGCGA
AGCGGAGGCGGAGACAGGTGGTGTCAGGGCGTCCTCTCGCCAGGCCGCAGGCCCCGCGGGGCAACAGGAC
ACTGGCCCCTGGCAGGCGGGCGCGGGGCCCTCGGGCTCGATGGGGAGAGGCCGGGGCCGGCGGCGGCGGA
TGGACGCTGGCTCGGGAGACAGAGCCCGCCGCCCCCGGAAACTGGACCCGCTCCGCCTGGGCGCCGCGGG
GAGCGTGTGGGACGCGGTGGACGGGGCCGCCGCCCTGGACGCCCACGCGCGCGGCCTCCCCACAGGACCC
CCACTCGCCCAGGAGCCCGCACTCCCGGCGCTGCCCGCTCCCCGCGCCCTGCAGCCTGGGTCTCAGACGG
AAGGCTCTGGGGCCAAGGGTGGCTGGAGCAGGGAGGCCTCGGGGGTCCCTGCCCCCGGAGGAGGCTGGCC
CTGGGTCAGCAGGGAGGTCCCGGGCACCCGGAGCTTTGGCCCAGCCCCAGACTCCACGCGCCCCTGGCTA
GAGAGTCCGCCTCAAGGTCGCCCACTCTCGTCCCAAGGGCCGGGTGCCACAGGGGCCTACGATGCCGGCG
AGGCCGGGGCTGACAGCTCCCGAGATAACAGTCCTGCCGCTGACCTGGGGCCCACCCGGCCCCCGGAGCA
AGCAAAGCCGGCTGCAGCCGGCCACAGCCGCGCGCCCTCCCGGAGCCGTGAGCCTCGCCCGCGCTCCGCC
TCCCCGCCCGCAGCTCCCGGCCCGGGGTTCCCACCTGAAGCCCTGACTCTCCCCTCTCCTTCAGACTTTT
TGCCCCTGGAGGTTACCCAGGATCCTTCCGTGGGCGAAAATCTCAGAGCGGCGCCAGCCCCAAGTTCAGC
CTCAGCCCAAGTCTTAACTTCAGCTCCAGCCTCAGTCCTAGCCCCAGCCCTGGCTTCATCCCCCAGCTCA
GCACCAACCTCAGCCACCACCTCAACCTCATCCCCCACCTCAGCCCCAGCCCCAGCTCCAACCTCAGCTC
CAACTTCAACCCCAGCCCCAGCCCCAAGTCCAGCTGCAGCCGCAACTCCAGCCCCAGCCCCAGTCCCAGT
CCCAACCCTCACACCCCCATCCCCAGCCCTAACCCCAGTCCCAACCCCAGCCCTAAGCCCAGCTCCAACT
CCAGCCCTAACCCCAGCCGCATCCCCAGCCCTAACCCCAGTCCCAACCCCAGCCCTAAGCCCAGCTCCAA
CTCCAGCCCCAACCCCAGCCGCATCCCCTGCCCCAGCCCCCACCTCAGCCCCAACCCCAACCCCAGCCGC
ATCCCCTGCCCCAGCTGACGGGTCAAAGCCTCAGGAGAGTGTGGCTCTCCCCAGGCGCTACCAGGAGGGG
CAGGTCTCAGCCAGCTGGGGAAACCTTATTGCCATGGTTCTTAGAAGCCACCCCTTCCCCAGGCAAGACA
GGCCCCAAGGGAGTGTCCCGAGGGCGGTTCCCGGGAGCCCCGTGGGTCCCAGCACTTCCACACACTCTGA
GGACAGACACGGCCCCTCTTCTTCAGTGGGGACAGTCATAGGGACAGGTACAGGGGGCCTGGTTGAGGCT
GGAGGTCAGCCACAGCCAAGAAGCTCCGAGACCAACGGATCGCCCAGCCCAGACCCTCCCCCAGGCCTAA
GAGGAGAGGGAACCAGGGAGAAAAGTCTAGACCCGCTGCCCCAAGCCGCGATGCCCAGGGGCCCCGCACA
GCCCCCCGCGCAGAGGCCGCCTGGCCCCGCGGCCTCCTCCTCTGCGAGGCGCTCACAGCCGGTACCCCAG
CTACGGAAACGCAGCAGGTGCGAAATCGCCCCGAGCTCGGAGCAGGAGGTCAGGCCGGCCGCCTCGGGGG
ACCCTCAAGGGGAGGCGCCGGGGGAGGGGGGCAGCCCTGCCGGCCGCAGCGGGGCGCTCACGGAAAAGCA
GGAGGAGGCCCGGAAGCTCATGGTGTTTCTGCAGAGGCCCGGGGGTTGGGGGGTGGTGGAGGGGCCCCGG
AAGCCCAGCTCCCGGGCCCTGGAGCCCGCCACGGCGGCAGCCCTGCGGCGGCGGCTGGACCTGGGCAGTT
GCCTGGACGTGCTGGCCTTTGCCCAGCAGCACGGAGAGCCCGGCCTGGCGCAGGAGACCTACGCGCTGAT
GAGCGACAACCTGCTGCGAGTGCTGGGAGACCCGTGCCTCTACCGCCGGCTGAGCGCGGCCGACCGCGAG
CGCATCCTCAGCCTGCGGACCGGCCGGGGCCGGGCGGTGCTGGGCGTCCTCGTACTGCCCAGCCTCTACC
AGGGGGGCCGCTCAGGGCTCCCCAGGGGCCCTCGTGGCGAGGAGCCTCCTGCGGCGGCCCCTGTGTCCCT
GCCTCTACCTGCGCACCTGCATGTGTTCAACCCCCGGGAGAACACCTGGCGGCCCCTGACCCAGGTGCCC
GAGGAGGCCCCGCTTCGGGGCTGCGGTCTCTGCACCATGCACAACTACCTGTTTCTGGCGGGGGGCATCC
GTGGCTCCGGTGCCAAGGCCGTCTGCTCCAACGAGGTCTTCTGCTACAACCCTCTGACCAACATCTGGAG
CCAGGTTCGGCCCATGCAGCAGGCCCGAGCCCAGCTCAAGCTGGTGGCCCTGGACGGGCTGCTCTATGCC
ATCGGTGGCGAATGCCTGTACAGCATGGAGTGCTACGACCCGCGAACAGACGCCTGGACCCCACGCGCGC
CACTCCCCGCAGGCACCTTCCCTGTGGCCCACGAGGCTGTGGCCTGCCGTGGGGACATCTACGTCACCGG
GGGTCACCTCTTCTACCGCCTGCTCAGGTACAGCCCCGTGAAGGATGCTTGGGACGAGTGCCCATACAGT
GCCAGCCACCGGCGTTCCAGCGACATCGTGGCACTGGGGGGCTTCCTGTACCGCTTCGACCTGCTGCGGG
GCGTGGGCGCCGCCGTGATGCGCTACAACACAGTGACCGGCTCCTGGAGCAGGGCTGCCTCCCTGCCCCT
GCCCGCCCCCGCCCCACTGCACTGCACCACCCTGGGCAACACCATTTACTGCCTCAACCCCCAGGTCACT
GCCACCTTCACGGTCTCTGGGGGGACTGCCCAGTTCCAGGCCAAGGAGCTGCAGCCCTTCCCCTTGGGGA
GCACCGGGGTCCTCAGTCCATTCATCCTGACTCTGCCCCCTGAGGACCGGCTGCAGACCTCACTCTGA

Translation (1235 aa):
MIQGTLEPDGPLWGWDWDSDNDWDSAVLALLALAVVAATALALHWFGSGHDQEAAEPVSTALGAQPHQAG
GAELALQPKSKVSDGSEGQSPGQGKPEPPGRGQQSPVPAAAPGGGLAAMARLPLKTAVEEARREALGQQR
GSATPAAPRAEGKEPPRPGTALLGRSEAGGMSAPLLIHFTPRSPGSEAEAETGGVRASSRQAAGPAGQQD
TGPWQAGAGPSGSMGRGRGRRRRMDAGSGDRARRPRKLDPLRLGAAGSVWDAVDGAAALDAHARGLPTGP
PLAQEPALPALPAPRALQPGSQTEGSGAKGGWSREASGVPAPGGGWPWVSREVPGTRSFGPAPDSTRPWL
ESPPQGRPLSSQGPGATGAYDAGEAGADSSRDNSPAADLGPTRPPEQAKPAAAGHSRAPSRSREPRPRSA
SPPAAPGPGFPPEALTLPSPSDFLPLEVTQDPSVGENLRAAPAPSSASAQVLTSAPASVLAPALASSPSS
APTSATTSTSSPTSAPAPAPTSAPTSTPAPAPSPAAAATPAPAPVPVPTLTPPSPALTPVPTPALSPAPT
PALTPAASPALTPVPTPALSPAPTPAPTPAASPAPAPTSAPTPTPAASPAPADGSKPQESVALPRRYQEG
QVSASWGNLIAMVLRSHPFPRQDRPQGSVPRAVPGSPVGPSTSTHSEDRHGPSSSVGTVIGTGTGGLVEA
GGQPQPRSSETNGSPSPDPPPGLRGEGTREKSLDPLPQAAMPRGPAQPPAQRPPGPAASSSARRSQPVPQ
LRKRSRCEIAPSSEQEVRPAASGDPQGEAPGEGGSPAGRSGALTEKQEEARKLMVFLQRPGGWGVVEGPR
KPSSRALEPATAAALRRRLDLGSCLDVLAFAQQHGEPGLAQETYALMSDNLLRVLGDPCLYRRLSAADRE
RILSLRTGRGRAVLGVLVLPSLYQGGRSGLPRGPRGEEPPAAAPVSLPLPAHLHVFNPRENTWRPLTQVP
EEAPLRGCGLCTMHNYLFLAGGIRGSGAKAVCSNEVFCYNPLTNIWSQVRPMQQARAQLKLVALDGLLYA
IGGECLYSMECYDPRTDAWTPRAPLPAGTFPVAHEAVACRGDIYVTGGHLFYRLLRYSPVKDAWDECPYS
ASHRRSSDIVALGGFLYRFDLLRGVGAAVMRYNTVTGSWSRAASLPLPAPAPLHCTTLGNTIYCLNPQVT
ATFTVSGGTAQFQAKELQPFPLGSTGVLSPFILTLPPEDRLQTSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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