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Report for CCDS2945.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
2945.1 |
Public |
Homo sapiens |
3 |
NXPE3 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:91775](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:2945.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:91775](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 3 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 2945.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000273347.10 |
ENSP00000273347.5 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000273347.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000273347.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000273347](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000273347](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000491511.6 |
ENSP00000417485.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000491511.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000417485.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000491511](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000417485](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000477909.5 |
ENSP00000418369.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000477909.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000418369.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000477909](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000418369](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000495842.6 |
ENSP00000418381.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000495842.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000418381.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000495842](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000418381](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000474165.6 |
ENSP00000419667.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000474165.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000419667.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000474165](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000419667](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000704530.1 |
ENSP00000515919.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000704530.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000515919.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000704530](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000515919](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000704532.1 |
ENSP00000515920.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000704532.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000515920.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000704532](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000515920](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000704539.1 |
ENSP00000515927.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000704539.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000515927.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000704539](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000515927](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000487830.2 |
ENSP00000515931.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000487830.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000515931.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000487830](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000515931](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000704551.1 |
ENSP00000515939.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000704551.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000515939.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000704551](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000515939](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000704552.1 |
ENSP00000515940.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000704552.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000515940.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000704552](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000515940](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001134456.2 |
NP_001127928.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001134456.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001127928.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001134456](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001127928](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001127928.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001348990.2 |
NP_001335919.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001348990.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001335919.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001348990](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001335919](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001335919.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001348991.2 |
NP_001335920.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001348991.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001335920.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001348991](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001335920](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001335920.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001348992.2 |
NP_001335921.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001348992.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001335921.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001348992](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001335921](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001335921.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001348993.2 |
NP_001335922.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001348993.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001335922.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001348993](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001335922](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001335922.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001348994.2 |
NP_001335923.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001348994.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001335923.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001348994](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001335923](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001335923.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001348995.2 |
NP_001335924.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001348995.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001335924.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001348995](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001335924](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001335924.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_145037.4 |
NP_659474.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_145037.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_659474.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_145037](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_659474](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_659474.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 2945.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1680 nt): ATGTGGACCAATTTCTTCAAACTACGGCTTTTCTGCTGTCTGCTTGCAGTGTTGATGGTGGTGGTGCTGG TCATCAATGTTACTCAGGTAGAGTACTTGGACCATGAGACTGTTTCAGCCACTTTCATCGACAGCAGTGG ACAGTTTGTTTCCTCCCAGGTGACAGGAATTAGCCGAAATCCCTACTGTGGCTATGATCAGCAGACCCTG TCCAGCCAGGAGCGCATGGAGGAGGACTCCTTGCTGGCTGCCTTGCACCGGCAGGTTCCTGATGTGGGCC CAGTCCCCTTTGTGAAGAGCACTGACCCTTCTTCCAGCTACTTTGTCATCTTGAACTCTGCTGCCTTCTT TAAGGTGGGAAGCCAGCTTGAGGTGCTGGTTCATGTGCAGGATTTTCAAAGAAAGCCCAAGAAGTATGGT GGAGACTACCTGCAGGCCAGAATTCACTCCCTCAAGCTGCAGGCTGGGGCTGTGGGCAGGGTGGTGGATT ACCAGAATGGGTTTTACAAGGTTTTCTTTACTTTGCTATGGCCAGGCAAAGTTAAAGTATCCGTATCTCT GGTCCACCCCAGTGAAGGGATCAGAGTTCTTCAGCGCTTACAGGAAGATAAACCAGACAGGGTCTATTTC AAGAGTCTCTTCCGTTCAGGAAGAATTTCTGAAACTACTGAGTGCAACGTGTGTCTTCCTGGGAATCTGC CCCTGTGTAACTTTACAGACCTCTACACTGGGGAGCCCTGGTTCTGCTTCAAACCAAAGAAGCTCCCTTG CAGCAGCAGAATTACCCATTTCAAAGGTGGATACCTGAAAGGTCTCCTAACCGCTGCAGAGAGTGCTTTC TTCCAGAGTGGTGTCAATATCAAAATGCCAGTCAACTCCAGTGGACCTGATTGGGTAACTGTGATTCCCA GGAGAATAAAAGAAACTAACAGTCTAGAACTATCTCAAGGCTCAGGAACTTTTCCTTCTGGGTATTATTA TAAAGACCAGTGGAGGCCCAGAAAGTTTAAGATGCGTCAGTTTAATGACCCTGACAACATTACAGAGTGC TTACAAAGAAAAGTGGTGCATTTATTTGGTGACTCAACAATCAGGCAATGGTTTGAATACCTTACTACAT TTGTTCCAGATTTAGTGGAGTTTAACTTGGGTAGTCCCAAGAATGTGGGTCCCTTCCTTGCAGTGGACCA GAAGCACAACATCCTGCTCAAATACCGCTGCCATGGTCCACCCATCCGCTTCACGACTGTCTTTAGCAAT GAGCTCCATTATGTGGCGAATGAGCTGAATGGCATTGTGGGAGGGAAGAACACAGTGGTTGCCATAGCTG TATGGTCTCACTTCAGCACCTTCCCTTTGGAAGTGTACATCCGGCGGCTCAGGAACATCCGTCGAGCAGT GGTTCGGCTCCTCGATCGAAGCCCAAAGACCGTGGTGGTCATCCGGACGGCCAACGCCCAAGAGCTGGGA CCTGAGGTGAGCCTTTTCAACAGCGACTGGTACAACTTTCAGCTGGACACCATCCTTCGGAGGATGTTCT CAGGGGTTGGAGTATATCTCGTCGATGCCTGGGAGATGACCCTGGCCCATTATCTACCGCACAAGCTGCA TCCAGATGAAGTTATTGTGAAGAACCAGCTGGACATGTTCTTGTCCTTTGTGTGCCCCTTGGAAACCTAG
Translation (559 aa): MWTNFFKLRLFCCLLAVLMVVVLVINVTQVEYLDHETVSATFIDSSGQFVSSQVTGISRNPYCGYDQQTL SSQERMEEDSLLAALHRQVPDVGPVPFVKSTDPSSSYFVILNSAAFFKVGSQLEVLVHVQDFQRKPKKYG GDYLQARIHSLKLQAGAVGRVVDYQNGFYKVFFTLLWPGKVKVSVSLVHPSEGIRVLQRLQEDKPDRVYF KSLFRSGRISETTECNVCLPGNLPLCNFTDLYTGEPWFCFKPKKLPCSSRITHFKGGYLKGLLTAAESAF FQSGVNIKMPVNSSGPDWVTVIPRRIKETNSLELSQGSGTFPSGYYYKDQWRPRKFKMRQFNDPDNITEC LQRKVVHLFGDSTIRQWFEYLTTFVPDLVEFNLGSPKNVGPFLAVDQKHNILLKYRCHGPPIRFTTVFSN ELHYVANELNGIVGGKNTVVAIAVWSHFSTFPLEVYIRRLRNIRRAVVRLLDRSPKTVVVIRTANAQELG PEVSLFNSDWYNFQLDTILRRMFSGVGVYLVDAWEMTLAHYLPHKLHPDEVIVKNQLDMFLSFVCPLET
|