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Report for CCDS21663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21663.1 Public Mus musculus 7 Gvin1 23 108 98 CCDS HistoryNCBI Gene:74558Re-query CCDS DB by CCDS ID:21663.1Re-query CCDS DB by GeneID:74558See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21663.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000006667.10 ENSMUSP00000006667.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000006667.10Link to Ensembl Protein Viewer:ENSMUSP00000006667.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000006667Re-query CCDS DB by Protein ID:ENSMUSP00000006667
Original member Current member EBI ENSMUST00000183409.1 ENSMUSP00000138950.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000183409.1Link to Ensembl Protein Viewer:ENSMUSP00000138950.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000183409Re-query CCDS DB by Protein ID:ENSMUSP00000138950
Original member Current member NCBI NM_001039160.2 NP_001034249.2 Accepted alive Link to Nucleotide Sequence:NM_001039160.2Link to Protein Sequence:NP_001034249.2Re-query CCDS DB by Nucleotide ID:NM_001039160Re-query CCDS DB by Protein ID:NP_001034249Link to BLAST:NP_001034249.2
Original member Current member NCBI NM_029000.3 NP_083276.2 Accepted alive Link to Nucleotide Sequence:NM_029000.3Link to Protein Sequence:NP_083276.2Re-query CCDS DB by Nucleotide ID:NM_029000Re-query CCDS DB by Protein ID:NP_083276Link to BLAST:NP_083276.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034249.2 2427 Q80SU7 2427 99.8764% 0 3
NP_083276.2 2427 Q80SU7 2427 99.8764% 0 3

Chromosomal Locations for CCDS 21663.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 106157977 106165260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (7284 nt):
ATGGCAACAGCAAAGTGTTTCACTGATGAGCCTCAGCTACAAAGCAGAAGGAAGCACAATCTCCAGGAGA
TGCTGACAGAAGTGGGACTGTCTGTTGACTACTGGTTACCTAAGCTTCAGGAAGATCTGGGTGTCACCTC
GGCCCAGGCCTTACAATATTTAGACAGGAATGACCTCCAGAAGCTGAAGTCCCAGACAACACACACATGG
GAGAAAAGGGCGCTGGAGAAGTTACTGGACTTCTCACAGCCAAACAGTGTTGCAGAGCTACAGGAGACTC
CAAGGGAGATGAAAAAGAACAGGCAGAGGCAGGCAGGACAAGCACTGCAGGCTCTGAAAGCCTTGCAGTC
AGAAGGGAAGCACAGAGAGGAAGAGGCAGTGAGGAGAAAAGAAGCAGAGCTGAGACAAGCAATGGAGATC
CCTGAGGAGTGCTGGCCAACGGCTGAAGTGTCCCTAAAAGACATCACTGAAATAATGGAGAGACATCTCA
GTCACATGGAACGGACCCTGGCTCACAGTCCAAACCTCTCAGATGGAGACCTGGTAAGATGGGCATCTGG
AGGGCTGGCTCTGCAGGGAATTTATAAGACCAACCACCCAAGAAGCCTGATTCAGAAGAGAGAAGAGCTA
CTCAGTGTCCCTAAGCAGTTCTCACTTGTTGGCCCAGAACATGGCACCGAAATAAAAACGATGGAATTTT
CATCTTTTCACGAACAAGCCATGTTTACAGAGACTATAAAGATGATGGGTTTCAGTTCAACCTCCTTGGT
TAAAGGCGAAGGATGGGGATTTAGTCTAGAAGCTGGTATAGATCAAAACGAACAGACAGCATCTGAGAAT
ACACACCAATCCCATTCAGAGCAAACTTATTTTTGCTCAGCCAGGTTCAGCTACATCCCATTGGCCACGT
GCCATTTTCACATCAATGATCTTGAACTCTCCAATGCTGCTCTCCAGGAACTAAAAACTATTGAAGAACT
CCTGGAGCAGACAACAGACCACCGAGATGGACTACCCTTACTAAGGCACAGGGCTGAAAACTTTTTCCAT
AGGTTTGGCTCTCATGCTAACCAAGGCCCTCTGCAACTGGGTGGAATCTACTGCTGGAAAGCCATTTCAG
AAGGTTTCAAAAGTGAGCACTTGGCTGATGTAAAGCAGCAAACAAGAGAGTCTTTGAATATTTACATTAT
GGGCAGTTATAGTGGCTTTGGAGTTAAAGTCGGTGCAAGTGTTAATATAGCAAACTCAAATTCAGAAACA
GCATCATTCAGTACAACTCATCTACACTCTCAAACCAAGGTACAACTATCTGTAGCCCAGATAGGTGGAC
CAGCAGAAGCAGATGGAATTGCCCAGTGGACAGCTGGCCTTGTAGTTAGCAATCAAACCTGGTCTGTCAT
TGATAGGGAACTGCAGTTGGTACCTATTTGGGACATCATCCTGTCTAGCCACAGAACTGATTTTAAGAAT
GCTCTTCAAGTGGCTAACTGCCTAAAAGACAACTACACTGCTCTGACTGAACTAGATGCCCAGATTCAAG
AGGGGGAAGAATTTCTGACTGCTAGAAAAGAAGCTAAGCTTTTCATAGAGGATGTGAAATGCTGGGAGGT
TTCTGATCCTGAAGAACAACTTACAAAGTTATTAGATTTTATGCAAACATTGAGTCAAAAAATAAAAAGT
TATAACATTTGGATTAATACATGTCTCACTGATTGGGATCTGCAGAATTTTCTAATAAATACTGTAAAGT
TCTGCAAAACTTCACCCACTTATAAAACTCAGTTTATTAAATCTCAGTTGTGCAGCCTTCTAGAACCTCA
TGTCTACAAAGTTACAAACTTTCCTGAGGCACACTCCATCATACAGTGGATCAATCAGTCAGAGTATGGG
GAAGAGCAAGTCAAAATCACCTCATTTTCTGAATTCATTAAGACCTTAAAGAAAACCCACAAATACCTGA
TGGAAGTGAATTTCAAAAATGAGGCCCCAGAAACAGTGGAAGAAGCAGAAAGAACGGCTACATATGAGGT
CACCACAGCTCTCAGCTCCTTCTTGAAGTACCTCAAAGAAACAGAACAGCCAGACATGCAGCTGCTGCTG
CTTTCCATTGCAGCTGGTGCAGGCTATCAGTTGGTAAACAGTATTTTTCAGCATCTTCTGGGGTGTGATG
AGTTAAACTTCCTCTTGGATCAAATGCAAAGTAACCAACACAAATACCAAGAGCTTAAAAATATTTGCAA
CTACAGAGCCCAGGCATTCCTGGTGCTCACAGCTCTAAGAACCACAGTTGAAATCACAGATATTTCTACA
GAAGAGAAAAGACAACGTTTGGCATTAATTAAACAACATATGGGGACACTGTTGTCTGAAGAAGTTGCAC
ATGTTCTCACAAAACATGGAGAACATCATGACTGGGAAAGTCTGGAGAATGATTTGAGACTACTCATTGA
GGGGGACTATAAAGCCACCACCCATTACTTACAAATGGATGAGGTAAAAAAACAATTGCAAAGTCTCTGC
CATGGAAAGAAACAGACCTATAAACAAAAAAGTAATGAAAACATCACAAAAGGAATGATAGAAAATGGAC
CTTTCCTGAAATTACTCCAACGTCTAGGCCTAGACAATTACTATCCAAAAAGGATGAGCAGAGCTGACTT
CCATCTGATCTATAAGACCTCTGTGTACAATTCACAGCCAAGGTCTGAAAAGGAGCTTCCATTCTATTTC
CTACAAAAGCTACTGATGTTGGATTATGGGTTCAGACATCTGATAGTCAAAGATGATGAAAACATAAAAA
AACAAATCTCCATAGGTTCCTCCAATCACGAAAATGAAGATATTGATCCATATGACGATGTCATTATAGA
CAATGATAGTCCTGGCTATCCTTCAGCCACTGAGTCCTGGCCCCACATTCACCCATTGGATATCCAGATG
ACCATTTTACACTGTGCAGATGATCTTACCAGGCAATATATTTTCTCTAAACTTTCCATTTGTCATTATG
CACTCCCCCTTGTGGTACCAAATCCCAACACTTCTCAGATTGAATTTTATCTTTGGTCTCTCAGACAAAT
TAGGAAAAGTTGGCAAGATGCAAGTAAATCTCCACAGGACAAGAGCTACAGTCACAGAAATCAGCAGATG
TGTCGTGTCTCTACCCCCATTGTGTCCTTCATTAGAGTTGGAAATGACCTCTCTGCTTCCAAATCTCAGA
TCATGAACTCTCTTCTCAGTAAACGTAAACATGACGTGTTTTTTCACAGACACTGCAAAGGAAGCAACAA
ACACTGTCTCCTGATGCAGGGAGTGGTGGAAATCTGCTGGTTCTGTCCTGCCGGCCAAGGTGAGGACACG
TTTGAAAATTGTCTGACCTTCACCAGTCTTCATGGAGATGCAAAGGAACACACCCAACAACTCAGCTTCC
TCCAACATGTCTCTTCTATCATTGTGGTCCTCATGTCAGTTTCTGATAACAATAAAGAAAACCAAAAGCT
TGTCAGACACCTCTGGCAGTCATCAACACCTTTGATCTGCTTGATTGATGACAAAGAAAAGGCCATAGCA
AATACTTCTGGTAAAAGAATGAGAATTGGCATCAAGAATAGAAATGAGGCAGAATTAACAGAGGAGCTCA
CCAATGCCATCAAACATTTTCTAGAGCTCTCTAACACTGTTCTCAGTTTAGAGGACTGTTCACAGACAGC
TAGAGAGCTAGGATTCATTATTGATGAAGACCAGAGAGACTGCAAGGAAGCCAAAGAAAAGGCTCAGACT
GTAATGGCCCTCCTGGAGGAATACAAGTTATCTCAGACAAAAGAAAATTTACTACCCCTTCAAGGACAAC
TTTGGCACCTTTGGTGTAAGAAAGACAAAGAATTCTATCATCTGAGAGAAAAGGGGAATCGGAGCATCGA
ACAACACAAGAGTGAGATTGAAACACATAAAAGAAAAATTCGACGTCAACAGTTGGAAAAAGCCTTTCCT
CTCAATGATTTAATGCGCTCTGTTCTCGAACTCCTCCAAGACTATTCAGAAACACATAACAAACTCTACG
TTTTGCAGTGGCTCACTCTGTTTTTTGACAACCTGACAATAGATCACCTGGACAAATTACATGAAAGGCA
GAGATCTTTGTGGTTAAGGATACAAACAGAAAAGCAAAGAGCACAGAAGAGCAACTCTGTGCAGAATCAG
ATAGAAGCCATCTCCACAGAGATTCATAACTGTACTTTAGGAATTGAGCACCTTCTCCGAGAAGTTGGCC
AGATCTATGAAGCTCTGGAAGAAACTTCCTCCTCTAGAGATAGCCTTTTTCTCTGCCTCCCTCAAATTGC
TGCAGACCTGATGATAGCTGGTGTTCCCATTGAGCTGATGGACGGGGATGCTTCATATGTGCCTCTAAAG
TGGGTAGCAGCTATTTTTGACAAGATCACAGAGAAAGTTGGAGACAAAAGGCTGTTTGTTCTCTCTGTCC
TTGGCCTGCAGAGCTCAGGGAAGTCTACCCTACTGAATGCCCTGTTTGGCCTACAGTTCACAGTCAGTGC
AGGCAGGTGTACCAAGGGGGCCTACATGCAGCTCCTGAAGGTGGAAGAGACATTCACAGAAGAACTTGGC
TTTAATTATGTGCTTGTTATAGACACAGAAGGACTTCGAGCTCCAGAACTCAACAACAAATCCCAGAATT
GGGACCATGAGTTGGCAACATTAGTCATTGGCCTTGGAAACTTGACTCTGATCAATATTTTTGGGGAGAA
TCCCTCAGACATTCAGGACATTCTACAAATATCTGTTCAAGCATTTCTGAGAATGAAACAAGTGAAAATC
TCCCCCAGTTGCCTCTTTGTCCATCAGAATGTGGGAGAAGTTACAGCAAAAGACCAAACTATGGAAGGAC
GGAGGAGACTGGAGCAGAAACTGGATGAAATGACTGCATTGGCTGCTGAGTTGGAAGAGTGTTCCAACAT
AACCCGCTTCAGTGATGTAATTAAGTTTGATGCCAATCGACATGTCTACTACTTTGCTCACCTATGGGAT
GGCAATCCCCCAATGGCTCCTCCCAATCCTCGCTATAGCTACAATGTCCAGGAACTAAGGAATGAAATTC
TTTCAACTGCCCAGCAGGAATCTAGGGGAAGGATCTTGAAAATATCAGATTTCAAATTCAGAGTTCAAGA
TTTGTGGAAAGCCCTTGTCAGTGAAAACTTCATTTTCAGTTTCAGGAACACCCAAGAGGTCATAGCCATG
AGCAAACTGGAAACAAAGTATAATGAATGGACCTGGGAGCTAAGGAGTCATGTACTGGACTTACAGAATC
AGCTTGACAATCAGATTCAAAATGGAAAAATCCTGACACTCACATCTAATTTACTAGAGGAACCACTTAG
CAGGAAACTTAAAACCATCAAAGAAGAATTTGACAAATATTTTGAAGAAGACCCAGATTGTGAAATATTG
GTTCAGTGGAAAGCAAATTTTGAACACAAGTTACTAATCCTTAAAGATTCACTTATTTCAGACACCAGAC
AGAAATGCAATGAACATATCAGTCTTAAAAATAGCCAAGAAATACTTGATAACCAAAAGTCACAATATGA
AAATCAGTTGTTAGAGAGGAGCAGAAAGTTAGCTTTAAATTTGAAGGGTAAGGAATTAAGTGATGAAGAG
TTGCATGAGAAATTCAGGCAACTTTGGACAAGTTGGATTTATGATGTATCTTCCAATGTTCCTCATGTCA
CAGAGCCTAACATTGATTTGGACTCTGAAAATATCCTTCTGGAATATTTCAAGAAGGACAAAAATATTGT
GGAAAGACTAAAAATAAAGTCTCAAGGAAAGTTTGAAATCATGTATGACAAACATATTCAAATGAAAAAG
AAATACCTTTTACTTAGAAAGAGTTTAGAAACCTGTCATGTTGAATCCATCAAAAAGACAACCAACAACA
TTCAGTTAAAATTTACAGAAACACTTACAAACATTTGGAAACAAAAGCGTGATTACAGTCAGAATTACTT
TCATGAAATCTTGAGGATCATAGAAAATGAGCTGAAATCTGAACCCTGTGAGGGAGACTACACATTTACC
AAAGACTACATCATTGACTTATCCTTGTACTTATTCCAAAGAGCATCCAAGGATTTCAAGAAAATGCACG
CGGCATTCAAGACTGCAAATGACCCTGTGAACTATCTGGAGAGAAAGAAAGATGATTTCTTTATGAGTTT
TAAGATCTCCTGCCAAGGTGCCACTTCAATCACTTCCTTTGTTGACTTCCTATGGCTCAAGCTCACTCCT
GCTATCTCTGTCAGCATATGGAAAATAATGGTTCAAAAAATAGCTGGAGACATGCGAGCCACCTGCCCTG
AATTCAATGGAAACAGAGCTAACCTGGAGATACATATTCTCTACTCTCTAGCAGAAGAAGAAAAATTTGA
TAAATACTGGAAATACATTCAAAAGCCAGAGGAATTTTTCAGGGATTATATTAGAGACCACATTAAAAGA
TACTGTTCAGAAAAAGAGAGTGAAAAAATAAAAACTTTTTTAAACATAAGCTTAGGTGACATCAAGAATA
CTATCCTGTCTGCCATTCATAACTCCACAAAGGTAGCTAAAGCTAAAGGCAGCACTGCATCTCACTGGCT
GGATTTGTTCTGTGACCACCTAGGGAGCAACCTGGTCTTCCCAAGGAAAGACCTGGTAAGCATAGAGCAC
CAGGAGCTAATGGATACTGAGTTCCTCAAAGAAGCCATGAGCAAAGCTTTGGATCCTGCAATGAGGGAAG
TAGAAGAGGATTGTTCAAGTAAGCACATAGATGAAATTGTTCCTGACATTGAGAAAATTCTCTCTGAACA
TCTCTGTGGCTGTTGGAAACAGTGTCCTTTTTGTAAGGCAATTTGTACAAACACCATTCCCCAGCATGAA
GGAGACCACAGTGTGCCATTCCACCGTCCTCAGGCTGTCAGTGGTTGGCATTGGCATAAAACAGACCAGT
TCCACATTAATGTTTGTACTAGTAGTGTAGCAAGTAATATTTCCTTCATTTTAGATGGCTTCCGGGAATT
CCCACTCAAGAAATATCGAGAAGCAGGAGGTGATTATGCCACATGGAGCATCACCCCAGACTCATCTACC
CAGCCATATTGGAAATGGTTTGTCTGTCATTTCAGATCAAACCTAGAAGAGAATTATGGCAAAAAATTTA
CAGGGAAAGGTAGTCTTCCAGATTTATGGACCAAAATCACAAAGCAAGAAGTCCTGAATGACTTAAAAAA
ATAA

Translation (2427 aa):
MATAKCFTDEPQLQSRRKHNLQEMLTEVGLSVDYWLPKLQEDLGVTSAQALQYLDRNDLQKLKSQTTHTW
EKRALEKLLDFSQPNSVAELQETPREMKKNRQRQAGQALQALKALQSEGKHREEEAVRRKEAELRQAMEI
PEECWPTAEVSLKDITEIMERHLSHMERTLAHSPNLSDGDLVRWASGGLALQGIYKTNHPRSLIQKREEL
LSVPKQFSLVGPEHGTEIKTMEFSSFHEQAMFTETIKMMGFSSTSLVKGEGWGFSLEAGIDQNEQTASEN
THQSHSEQTYFCSARFSYIPLATCHFHINDLELSNAALQELKTIEELLEQTTDHRDGLPLLRHRAENFFH
RFGSHANQGPLQLGGIYCWKAISEGFKSEHLADVKQQTRESLNIYIMGSYSGFGVKVGASVNIANSNSET
ASFSTTHLHSQTKVQLSVAQIGGPAEADGIAQWTAGLVVSNQTWSVIDRELQLVPIWDIILSSHRTDFKN
ALQVANCLKDNYTALTELDAQIQEGEEFLTARKEAKLFIEDVKCWEVSDPEEQLTKLLDFMQTLSQKIKS
YNIWINTCLTDWDLQNFLINTVKFCKTSPTYKTQFIKSQLCSLLEPHVYKVTNFPEAHSIIQWINQSEYG
EEQVKITSFSEFIKTLKKTHKYLMEVNFKNEAPETVEEAERTATYEVTTALSSFLKYLKETEQPDMQLLL
LSIAAGAGYQLVNSIFQHLLGCDELNFLLDQMQSNQHKYQELKNICNYRAQAFLVLTALRTTVEITDIST
EEKRQRLALIKQHMGTLLSEEVAHVLTKHGEHHDWESLENDLRLLIEGDYKATTHYLQMDEVKKQLQSLC
HGKKQTYKQKSNENITKGMIENGPFLKLLQRLGLDNYYPKRMSRADFHLIYKTSVYNSQPRSEKELPFYF
LQKLLMLDYGFRHLIVKDDENIKKQISIGSSNHENEDIDPYDDVIIDNDSPGYPSATESWPHIHPLDIQM
TILHCADDLTRQYIFSKLSICHYALPLVVPNPNTSQIEFYLWSLRQIRKSWQDASKSPQDKSYSHRNQQM
CRVSTPIVSFIRVGNDLSASKSQIMNSLLSKRKHDVFFHRHCKGSNKHCLLMQGVVEICWFCPAGQGEDT
FENCLTFTSLHGDAKEHTQQLSFLQHVSSIIVVLMSVSDNNKENQKLVRHLWQSSTPLICLIDDKEKAIA
NTSGKRMRIGIKNRNEAELTEELTNAIKHFLELSNTVLSLEDCSQTARELGFIIDEDQRDCKEAKEKAQT
VMALLEEYKLSQTKENLLPLQGQLWHLWCKKDKEFYHLREKGNRSIEQHKSEIETHKRKIRRQQLEKAFP
LNDLMRSVLELLQDYSETHNKLYVLQWLTLFFDNLTIDHLDKLHERQRSLWLRIQTEKQRAQKSNSVQNQ
IEAISTEIHNCTLGIEHLLREVGQIYEALEETSSSRDSLFLCLPQIAADLMIAGVPIELMDGDASYVPLK
WVAAIFDKITEKVGDKRLFVLSVLGLQSSGKSTLLNALFGLQFTVSAGRCTKGAYMQLLKVEETFTEELG
FNYVLVIDTEGLRAPELNNKSQNWDHELATLVIGLGNLTLINIFGENPSDIQDILQISVQAFLRMKQVKI
SPSCLFVHQNVGEVTAKDQTMEGRRRLEQKLDEMTALAAELEECSNITRFSDVIKFDANRHVYYFAHLWD
GNPPMAPPNPRYSYNVQELRNEILSTAQQESRGRILKISDFKFRVQDLWKALVSENFIFSFRNTQEVIAM
SKLETKYNEWTWELRSHVLDLQNQLDNQIQNGKILTLTSNLLEEPLSRKLKTIKEEFDKYFEEDPDCEIL
VQWKANFEHKLLILKDSLISDTRQKCNEHISLKNSQEILDNQKSQYENQLLERSRKLALNLKGKELSDEE
LHEKFRQLWTSWIYDVSSNVPHVTEPNIDLDSENILLEYFKKDKNIVERLKIKSQGKFEIMYDKHIQMKK
KYLLLRKSLETCHVESIKKTTNNIQLKFTETLTNIWKQKRDYSQNYFHEILRIIENELKSEPCEGDYTFT
KDYIIDLSLYLFQRASKDFKKMHAAFKTANDPVNYLERKKDDFFMSFKISCQGATSITSFVDFLWLKLTP
AISVSIWKIMVQKIAGDMRATCPEFNGNRANLEIHILYSLAEEEKFDKYWKYIQKPEEFFRDYIRDHIKR
YCSEKESEKIKTFLNISLGDIKNTILSAIHNSTKVAKAKGSTASHWLDLFCDHLGSNLVFPRKDLVSIEH
QELMDTEFLKEAMSKALDPAMREVEEDCSSKHIDEIVPDIEKILSEHLCGCWKQCPFCKAICTNTIPQHE
GDHSVPFHRPQAVSGWHWHKTDQFHINVCTSSVASNISFILDGFREFPLKKYREAGGDYATWSITPDSST
QPYWKWFVCHFRSNLEENYGKKFTGKGSLPDLWTKITKQEVLNDLKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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