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Report for CCDS9419.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9419.1 Public Homo sapiens 13 ARL11 24 110 108 CCDS HistoryNCBI Gene:115761Re-query CCDS DB by CCDS ID:9419.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9419.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000282026.2 ENSP00000282026.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000282026.2Link to Ensembl Protein Viewer:ENSP00000282026.1Re-query CCDS DB by Nucleotide ID:ENST00000282026Re-query CCDS DB by Protein ID:ENSP00000282026
Original member Current member NCBI NM_138450.6 NP_612459.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138450.6Link to Protein Sequence:NP_612459.1Re-query CCDS DB by Nucleotide ID:NM_138450Re-query CCDS DB by Protein ID:NP_612459Link to BLAST:NP_612459.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612459.1 196 Q969Q4 196 100% 0 0

Chromosomal Locations for CCDS 9419.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 49630448 49631038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (591 nt):
ATGGGTTCTGTGAATTCCAGAGGTCACAAGGCGGAAGCCCAGGTGGTGATGATGGGCCTGGACTCGGCGG
GCAAGACCACGCTCCTTTACAAGCTGAAGGGCCACCAGCTGGTGGAGACCCTGCCCACTGTTGGTTTCAA
CGTGGAGCCTCTGAAAGCTCCTGGGCACGTGTCACTGACTCTCTGGGACGTTGGGGGGCAGGCCCCGCTC
AGAGCCAGCTGGAAGGACTATCTGGAAGGCACAGATATCCTCGTGTACGTGCTGGACAGCACAGATGAAG
CCCGCTTACCCGAGTCGGCGGCTGAGCTCACAGAAGTCCTGAACGACCCCAACATGGCTGGCGTCCCCTT
CTTGGTGCTGGCCAACAAGCAGGAGGCACCTGATGCACTTCCGCTGCTTAAGATCAGAAACAGGCTGAGT
CTAGAGAGATTCCAGGACCACTGCTGGGAGCTCCGGGGCTGCAGTGCCCTCACTGGGGAGGGGCTGCCCG
AGGCCCTGCAGAGCCTGTGGAGCCTCCTGAAATCTCGCAGCTGCATGTGTCTGCAGGCGAGAGCCCATGG
GGCTGAGCGCGGAGACAGCAAGAGATCTTGA

Translation (196 aa):
MGSVNSRGHKAEAQVVMMGLDSAGKTTLLYKLKGHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQAPL
RASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLS
LERFQDHCWELRGCSALTGEGLPEALQSLWSLLKSRSCMCLQARAHGAERGDSKRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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