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Report for CCDS21002.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21002.1 Public Mus musculus 7 Cyp2a4 23 108 98 CCDS HistoryNCBI Gene:13086Re-query CCDS DB by CCDS ID:21002.1Re-query CCDS DB by GeneID:13086See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21002.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098657.4 ENSMUSP00000096254.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098657.4Link to Ensembl Protein Viewer:ENSMUSP00000096254.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000098657Re-query CCDS DB by Protein ID:ENSMUSP00000096254
Original member Current member NCBI NM_009997.2 NP_034127.2 Accepted alive Link to Nucleotide Sequence:NM_009997.2Link to Protein Sequence:NP_034127.2Re-query CCDS DB by Nucleotide ID:NM_009997Re-query CCDS DB by Protein ID:NP_034127Link to BLAST:NP_034127.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034127.2 494 P15392 494 100% 0 0

Chromosomal Locations for CCDS 21002.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 26307218 26307397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26307650 26307812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26308513 26308662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26308928 26309088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26310706 26310882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26312187 26312328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26312767 26312954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26313555 26313696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26314703 26314884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1485 nt):
ATGCTGACCTCAGGACTCCTCCTGGTGGCTGCAGTGGCCTTCCTCAGCGTCCTGGTTTTGATGTCTGTCT
GGAAGCAGAGAAAGCTCTCAGGAAAGCTGCCTCCAGGACCCACCCCACTGCCCTTCGTTGGGAACTTCCT
TCAGCTGAACACAGAGCAAATGTACAACTCTCTCATGAAGATCAGCCAACGTTATGGTCCTGTATTCACC
ATCTATCTGGGATCTCGCCGAATTGTGGTGCTGTGCGGACAGGAGACAGTCAAGGAAGCTCTGGTGGACC
AAGCTGAGGAATTCAGCGGGCGGGGCGAGCAGGCTACCTTCGACTGGCTTTTCAAAGGCTATGGCATAGC
CTTCAGCAGCGGGGAGCGAGCCAAACAGCTAAGGCGCTTCTCCATCACCACGCTGCGGGACTTCGGCGTG
GGGAAGCGTGGCATCGAGGAGCGCATCCAAGAGGAGGCGGGCTTTCTCATCGATTCATTTCGGAAGACGA
ACGGTGCTTTCATTGACCCCACCTTCTACCTTAGCCGAACAGTCTCCAATGTCATTAGCTCAATCGTCTT
CGGGGACCGCTTTGACTATGAGGACAAAGAGTTCCTGTCACTTCTTAGAATGATGCTGGGAAGCCTCCAG
TTCACTGCTACCTCCATGGGGCAGGTCTATGAGATGTTTTCTTCTGTGATGAAACACCTGCCAGGGCCCC
AGCAACAGGCCTTTAAGGAGCTGCAAGGCCTGGAGGACTTTATAACCAAGAAAGTGGAACACAATCAGCG
CACGCTGGATCCCAATTCCCCAAGGGACTTCATCGACTCCTTCCTCATCCGAATGCTGGAGGAGAAGAAG
AACCCCAATACTGAGTTCTACATGAAGAACTTGGTGCTGACTACACTAAATCTCTTCTTTGCTGGCACAG
AGACCGTCAGCACCACCCTGCGCTATGGCTTTCTGTTGCTCATGAAGTACCCAGATATTGAGGCCAAGGT
CCATGAGGAGATTGATCGGGTGATTGGCAGGAACCGGCAGCCCAAGTATGAGGACCGAATGAAGATGCCC
TATACGGAGGCTGTAATCCATGAGATCCAGAGATTTGCAGACCTGATCCCCATGGGCCTGGCTCGAAGGG
TCACCAAGGACACCAAGTTTCGAGATTTCCTCCTCCCCAAGGGTACTGAAGTATTTCCTATGCTGGGCTC
TGTGCTGAAAGACCCCAAGTTCTTCTCCAACCCCAAAGACTTCAACCCAAAGCACTTCCTAGATGACAAG
GGACAGTTTAAGAAGAGTGATGCCTTTGTGCCCTTTTCCATTGGAAAACGGTATTGTTTCGGAGAAGGAC
TGGCTAGGATGGAACTCTTCCTCTTCCTCACAAACATCATGCAGAACTTCCACTTCAAATCCACACAGGA
ACCCCAGGACATCGATGTGTCTCCTAGACTCGTGGGCTTTGTCACGATCCCACCAACCTACACTATGAGT
TTCTTGTCCCGTTGA

Translation (494 aa):
MLTSGLLLVAAVAFLSVLVLMSVWKQRKLSGKLPPGPTPLPFVGNFLQLNTEQMYNSLMKISQRYGPVFT
IYLGSRRIVVLCGQETVKEALVDQAEEFSGRGEQATFDWLFKGYGIAFSSGERAKQLRRFSITTLRDFGV
GKRGIEERIQEEAGFLIDSFRKTNGAFIDPTFYLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLGSLQ
FTATSMGQVYEMFSSVMKHLPGPQQQAFKELQGLEDFITKKVEHNQRTLDPNSPRDFIDSFLIRMLEEKK
NPNTEFYMKNLVLTTLNLFFAGTETVSTTLRYGFLLLMKYPDIEAKVHEEIDRVIGRNRQPKYEDRMKMP
YTEAVIHEIQRFADLIPMGLARRVTKDTKFRDFLLPKGTEVFPMLGSVLKDPKFFSNPKDFNPKHFLDDK
GQFKKSDAFVPFSIGKRYCFGEGLARMELFLFLTNIMQNFHFKSTQEPQDIDVSPRLVGFVTIPPTYTMS
FLSR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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