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Report for CCDS7369.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7369.1 Public Homo sapiens 10 TSPAN14 24 110 108 CCDS HistoryNCBI Gene:81619Re-query CCDS DB by CCDS ID:7369.1Re-query CCDS DB by GeneID:81619See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7369.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372156.5 ENSP00000361229.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372156.5Link to Ensembl Protein Viewer:ENSP00000361229.1Re-query CCDS DB by Nucleotide ID:ENST00000372156Re-query CCDS DB by Protein ID:ENSP00000361229
Original member Current member EBI ENST00000372158.6 ENSP00000361231.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372158.6Link to Ensembl Protein Viewer:ENSP00000361231.1Re-query CCDS DB by Nucleotide ID:ENST00000372158Re-query CCDS DB by Protein ID:ENSP00000361231
Original member Current member EBI ENST00000429989.8 ENSP00000396270.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000429989.8Link to Ensembl Protein Viewer:ENSP00000396270.2Re-query CCDS DB by Nucleotide ID:ENST00000429989Re-query CCDS DB by Protein ID:ENSP00000396270
Original member Current member NCBI NM_001351266.2 NP_001338195.1 Accepted alive Link to Nucleotide Sequence:NM_001351266.2Link to Protein Sequence:NP_001338195.1Re-query CCDS DB by Nucleotide ID:NM_001351266Re-query CCDS DB by Protein ID:NP_001338195Link to BLAST:NP_001338195.1
Original member Current member NCBI NM_001351267.4 NP_001338196.1 Accepted alive Link to Nucleotide Sequence:NM_001351267.4Link to Protein Sequence:NP_001338196.1Re-query CCDS DB by Nucleotide ID:NM_001351267Re-query CCDS DB by Protein ID:NP_001338196Link to BLAST:NP_001338196.1
Original member Current member NCBI NM_001351268.2 NP_001338197.1 Accepted alive Link to Nucleotide Sequence:NM_001351268.2Link to Protein Sequence:NP_001338197.1Re-query CCDS DB by Nucleotide ID:NM_001351268Re-query CCDS DB by Protein ID:NP_001338197Link to BLAST:NP_001338197.1
Original member Current member NCBI NM_001351269.2 NP_001338198.1 Accepted alive Link to Nucleotide Sequence:NM_001351269.2Link to Protein Sequence:NP_001338198.1Re-query CCDS DB by Nucleotide ID:NM_001351269Re-query CCDS DB by Protein ID:NP_001338198Link to BLAST:NP_001338198.1
Original member Current member NCBI NM_001351270.2 NP_001338199.1 Accepted alive Link to Nucleotide Sequence:NM_001351270.2Link to Protein Sequence:NP_001338199.1Re-query CCDS DB by Nucleotide ID:NM_001351270Re-query CCDS DB by Protein ID:NP_001338199Link to BLAST:NP_001338199.1
Original member Current member NCBI NM_001351271.2 NP_001338200.1 Accepted alive Link to Nucleotide Sequence:NM_001351271.2Link to Protein Sequence:NP_001338200.1Re-query CCDS DB by Nucleotide ID:NM_001351271Re-query CCDS DB by Protein ID:NP_001338200Link to BLAST:NP_001338200.1
Original member Current member NCBI NM_001351272.2 NP_001338201.1 Accepted alive Link to Nucleotide Sequence:NM_001351272.2Link to Protein Sequence:NP_001338201.1Re-query CCDS DB by Nucleotide ID:NM_001351272Re-query CCDS DB by Protein ID:NP_001338201Link to BLAST:NP_001338201.1
Original member Current member NCBI NM_030927.4 NP_112189.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030927.4Link to Protein Sequence:NP_112189.2Re-query CCDS DB by Nucleotide ID:NM_030927Re-query CCDS DB by Protein ID:NP_112189Link to BLAST:NP_112189.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001338195.1 270 Q8NG11-1 270 100% 0 0
NP_001338196.1 270 Q8NG11-1 270 100% 0 0
NP_001338197.1 270 Q8NG11-1 270 100% 0 0
NP_001338198.1 270 Q8NG11-1 270 100% 0 0
NP_001338199.1 270 Q8NG11-1 270 100% 0 0
NP_001338200.1 270 Q8NG11-1 270 100% 0 0
NP_001338201.1 270 Q8NG11-1 270 100% 0 0
NP_112189.2 270 Q8NG11-1 270 100% 0 0

Chromosomal Locations for CCDS 7369.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80489234 80489314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80504728 80504778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80507228 80507374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80509301 80509471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80512144 80512269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80514019 80514063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80516204 80516323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80517905 80517976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (813 nt):
ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACA
TCATCTTCTGGTTGGCTGGAGTTGTCTTCCTTGGAGTCGGGCTGTGGGCATGGAGCGAAAAGGGTGTGCT
GTCCGACCTCACCAAAGTGACCCGGATGCATGGAATCGACCCTGTGGTGCTGGTCCTGATGGTGGGCGTG
GTGATGTTCACCCTGGGGTTCGCCGGCTGCGTGGGGGCTCTGCGGGAGAATATCTGCTTGCTCAACTTTT
TCTGTGGCACCATCGTGCTCATCTTCTTCCTGGAGCTGGCTGTGGCCGTGCTGGCCTTCCTGTTCCAGGA
CTGGGTGAGGGACCGGTTCCGGGAGTTCTTCGAGAGCAACATCAAGTCCTACCGGGACGATATCGATCTG
CAAAACCTCATCGACTCCCTTCAGAAAGCTAACCAGTGCTGTGGCGCATATGGCCCTGAAGACTGGGACC
TCAACGTCTACTTCAATTGCAGCGGTGCCAGCTACAGCCGAGAGAAGTGCGGGGTCCCCTTCTCCTGCTG
CGTGCCAGATCCTGCGCAAAAAGTTGTGAACACACAGTGTGGATATGATGTCAGGATTCAGCTGAAGAGC
AAGTGGGATGAGTCCATCTTCACGAAAGGCTGCATCCAGGCGCTGGAAAGCTGGCTCCCGCGGAACATTT
ACATTGTGGCTGGCGTCTTCATCGCCATCTCGCTGTTGCAGATATTTGGCATCTTCCTGGCAAGGACGCT
GATCTCAGACATCGAGGCAGTGAAGGCCGGCCATCACTTCTGA

Translation (270 aa):
MHYYRYSNAKVSCWYKYLLFSYNIIFWLAGVVFLGVGLWAWSEKGVLSDLTKVTRMHGIDPVVLVLMVGV
VMFTLGFAGCVGALRENICLLNFFCGTIVLIFFLELAVAVLAFLFQDWVRDRFREFFESNIKSYRDDIDL
QNLIDSLQKANQCCGAYGPEDWDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVNTQCGYDVRIQLKS
KWDESIFTKGCIQALESWLPRNIYIVAGVFIAISLLQIFGIFLARTLISDIEAVKAGHHF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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