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Report for CCDS6766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6766.1 Public Homo sapiens 9 FKTN 24 110 108 CCDS HistoryNCBI Gene:2218Re-query CCDS DB by CCDS ID:6766.1Re-query CCDS DB by GeneID:2218See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6766.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000223528.6 ENSP00000223528.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000223528.6Link to Ensembl Protein Viewer:ENSP00000223528.2Re-query CCDS DB by Nucleotide ID:ENST00000223528Re-query CCDS DB by Protein ID:ENSP00000223528
Original member Current member EBI ENST00000357998.10 ENSP00000350687.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357998.10Link to Ensembl Protein Viewer:ENSP00000350687.6Re-query CCDS DB by Nucleotide ID:ENST00000357998Re-query CCDS DB by Protein ID:ENSP00000350687
Original member Current member NCBI NM_001079802.2 NP_001073270.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001079802.2Link to Protein Sequence:NP_001073270.1Re-query CCDS DB by Nucleotide ID:NM_001079802Re-query CCDS DB by Protein ID:NP_001073270Link to BLAST:NP_001073270.1
Original member Current member NCBI NM_001351496.2 NP_001338425.1 Accepted alive Link to Nucleotide Sequence:NM_001351496.2Link to Protein Sequence:NP_001338425.1Re-query CCDS DB by Nucleotide ID:NM_001351496Re-query CCDS DB by Protein ID:NP_001338425Link to BLAST:NP_001338425.1
Original member Current member NCBI NM_006731.2 NP_006722.2 Accepted alive Link to Nucleotide Sequence:NM_006731.2Link to Protein Sequence:NP_006722.2Re-query CCDS DB by Nucleotide ID:NM_006731Re-query CCDS DB by Protein ID:NP_006722Link to BLAST:NP_006722.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073270.1 461 O75072-1 461 100% 0 0
NP_001338425.1 461 O75072-1 461 100% 0 0
NP_006722.2 461 O75072-1 461 100% 0 0

Chromosomal Locations for CCDS 6766.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 105575033 105575137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105596598 105596657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105601145 105601348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105604215 105604492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105607819 105607951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105615278 105615407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105617959 105618092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105619934 105620061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 105635051 105635264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1386 nt):
ATGAGTAGAATCAATAAGAACGTGGTTTTGGCCCTTTTAACGCTGACAAGTTCTGCATTTCTGCTGTTTC
AGTTGTACTACTACAAGCACTATTTATCAACAAAGAATGGAGCTGGTTTGTCAAAATCCAAAGGAAGCCG
AATTGGATTTGATAGCACACAGTGGCGTGCAGTTAAAAAATTTATTATGTTAACATCCAACCAAAATGTA
CCAGTGTTTCTTATTGATCCTTTGATACTGGAATTGATTAATAAGAACTTTGAACAAGTCAAAAATACTT
CTCATGGCTCTACTTCACAATGCAAGTTTTTCTGTGTTCCAAGAGACTTTACTGCATTTGCACTGCAGTA
TCACCTATGGAAGAATGAGGAAGGCTGGTTTCGGATAGCTGAGAATATGGGATTTCAGTGCCTAAAGATT
GAGAGTAAAGATCCCCGGCTAGACGGGATAGACTCACTCTCTGGAACTGAAATCCCCCTGCACTATATCT
GCAAACTGGCCACTCATGCGATCCACTTGGTAGTCTTTCATGAGAGGAGTGGCAACTACCTCTGGCACGG
CCACTTGAGACTTAAAGAACACATTGACAGGAAATTTGTTCCCTTCCGAAAGTTACAGTTTGGTCGTTAT
CCAGGAGCTTTTGACAGGCCAGAGTTACAGCAAGTTACTGTTGATGGACTGGAAGTTCTCATTCCAAAGG
ATCCAATGCACTTTGTAGAAGAAGTACCACACTCTAGGTTTATTGAGTGTAGGTATAAAGAAGCTCGAGC
ATTCTTTCAGCAGTACCTTGATGATAACACTGTGGAAGCTGTGGCCTTTCGGAAGAGTGCAAAGGAATTA
CTGCAACTAGCAGCGAAAACATTAAACAAATTGGGAGTACCATTCTGGCTGAGCAGTGGAACTTGTCTAG
GATGGTATCGACAATGCAACATTATTCCTTATAGCAAAGATGTTGACCTAGGAATTTTTATACAAGATTA
CAAATCTGATATTATTTTAGCATTTCAGGATGCAGGACTTCCGCTCAAACACAAATTTGGGAAGGTAGAA
GACAGCTTGGAACTATCCTTCCAGGGAAAAGATGATGTAAAACTTGATGTTTTTTTCTTCTATGAAGAAA
CTGATCACATGTGGAATGGAGGCACTCAGGCCAAAACAGGAAAAAAATTCAAATACCTGTTTCCGAAGTT
TACACTGTGCTGGACTGAGTTTGTAGACATGAAGGTCCATGTACCCTGTGAAACCCTCGAATACATTGAA
GCCAACTATGGTAAGACCTGGAAGATTCCTGTAAAGACGTGGGACTGGAAGCGCTCTCCTCCCAATGTGC
AACCCAATGGAATCTGGCCTATTTCTGAGTGGGATGAGGTTATCCAGTTATATTGA

Translation (461 aa):
MSRINKNVVLALLTLTSSAFLLFQLYYYKHYLSTKNGAGLSKSKGSRIGFDSTQWRAVKKFIMLTSNQNV
PVFLIDPLILELINKNFEQVKNTSHGSTSQCKFFCVPRDFTAFALQYHLWKNEEGWFRIAENMGFQCLKI
ESKDPRLDGIDSLSGTEIPLHYICKLATHAIHLVVFHERSGNYLWHGHLRLKEHIDRKFVPFRKLQFGRY
PGAFDRPELQQVTVDGLEVLIPKDPMHFVEEVPHSRFIECRYKEARAFFQQYLDDNTVEAVAFRKSAKEL
LQLAAKTLNKLGVPFWLSSGTCLGWYRQCNIIPYSKDVDLGIFIQDYKSDIILAFQDAGLPLKHKFGKVE
DSLELSFQGKDDVKLDVFFFYEETDHMWNGGTQAKTGKKFKYLFPKFTLCWTEFVDMKVHVPCETLEYIE
ANYGKTWKIPVKTWDWKRSPPNVQPNGIWPISEWDEVIQLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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