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Report for CCDS8926.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8926.1 Public Homo sapiens 12 SDR9C7 24 110 108 CCDS HistoryNCBI Gene:121214Re-query CCDS DB by CCDS ID:8926.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8926.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000293502.2 ENSP00000293502.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000293502.2Link to Ensembl Protein Viewer:ENSP00000293502.1Re-query CCDS DB by Nucleotide ID:ENST00000293502Re-query CCDS DB by Protein ID:ENSP00000293502
Original member Current member NCBI NM_148897.3 NP_683695.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_148897.3Link to Protein Sequence:NP_683695.1Re-query CCDS DB by Nucleotide ID:NM_148897Re-query CCDS DB by Protein ID:NP_683695Link to BLAST:NP_683695.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_683695.1 313 Q8NEX9 313 100% 0 0

Chromosomal Locations for CCDS 8926.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 56923833 56924050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56929390 56929553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56930226 56930484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 56933961 56934261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGGCGGCCCTCACAGACCTCTCATTTATGTATCGCTGGTTCAAGAACTGCAATCTGGTTGGCAACCTCT
CAGAGAAGTACGTCTTCATCACAGGCTGTGACTCTGGCTTCGGGAACCTGCTGGCCAAACAGCTGGTTGA
TCGGGGCATGCAGGTGCTGGCTGCTTGCTTCACTGAGGAGGGATCCCAGAAACTTCAGCGGGATACCTCC
TATCGGCTGCAGACCACCCTACTGGATGTCACCAAGAGCGAAAGCATCAAGGCGGCGGCCCAGTGGGTGA
GGGACAAAGTGGGCGAACAAGGCCTCTGGGCCCTGGTGAACAATGCTGGTGTGGGCCTGCCCAGTGGTCC
CAACGAATGGCTGACCAAGGATGACTTTGTGAAGGTGATTAATGTGAACCTGGTGGGACTGATCGAAGTG
ACCCTTCACATGCTGCCCATGGTCAAGAGAGCCCGGGGCAGGGTTGTCAACATGTCCAGCTCTGGTGGTC
GTGTGGCTGTCATTGGTGGTGGCTACTGCGTCTCCAAGTTTGGCGTTGAGGCCTTCTCTGACAGCATAAG
GCGTGAGCTCTACTACTTTGGGGTGAAAGTCTGCATCATTGAGCCAGGGAACTATCGGACAGCCATTCTC
GGCAAGGAGAACCTGGAGTCACGCATGCGAAAGCTTTGGGAGAGGCTGCCTCAGGAGACCCGGGACAGCT
ACGGAGAGGATTATTTCCGCATCTATACTGACAAGTTAAAAAACATAATGCAGGTGGCAGAGCCCAGAGT
CAGAGATGTCATCAACAGCATGGAGCATGCTATTGTTTCCCGGAGCCCTCGCATCCGCTACAACCCTGGC
CTGGATGCCAAACTCCTCTACATCCCTCTGGCTAAGTTGCCCACCCCTGTGACAGATTTCATCCTAAGCC
GGTACCTTCCAAGGCCAGCGGACAGTGTCTAA

Translation (313 aa):
MAALTDLSFMYRWFKNCNLVGNLSEKYVFITGCDSGFGNLLAKQLVDRGMQVLAACFTEEGSQKLQRDTS
YRLQTTLLDVTKSESIKAAAQWVRDKVGEQGLWALVNNAGVGLPSGPNEWLTKDDFVKVINVNLVGLIEV
TLHMLPMVKRARGRVVNMSSSGGRVAVIGGGYCVSKFGVEAFSDSIRRELYYFGVKVCIIEPGNYRTAIL
GKENLESRMRKLWERLPQETRDSYGEDYFRIYTDKLKNIMQVAEPRVRDVINSMEHAIVSRSPRIRYNPG
LDAKLLYIPLAKLPTPVTDFILSRYLPRPADSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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