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Report for CCDS43618.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43618.1 Public Homo sapiens 7 ZNF3 24 110 108 CCDS HistoryNCBI Gene:7551Re-query CCDS DB by CCDS ID:43618.1Re-query CCDS DB by GeneID:7551See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43618.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000413658.6 ENSP00000399951.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000413658.6Link to Ensembl Protein Viewer:ENSP00000399951.2Re-query CCDS DB by Nucleotide ID:ENST00000413658Re-query CCDS DB by Protein ID:ENSP00000399951
Original member Current member NCBI NM_001371210.1 NP_001358139.1 Accepted alive Link to Nucleotide Sequence:NM_001371210.1Link to Protein Sequence:NP_001358139.1Re-query CCDS DB by Nucleotide ID:NM_001371210Re-query CCDS DB by Protein ID:NP_001358139Link to BLAST:NP_001358139.1
Original member Current member NCBI NM_017715.4 NP_060185.2 Accepted alive Link to Nucleotide Sequence:NM_017715.4Link to Protein Sequence:NP_060185.2Re-query CCDS DB by Nucleotide ID:NM_017715Re-query CCDS DB by Protein ID:NP_060185Link to BLAST:NP_060185.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001358139.1 131 P17036-2 131 100% 0 0
NP_060185.2 131 P17036-2 131 100% 0 0

Chromosomal Locations for CCDS 43618.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100064788 100064912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100075135 100075261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100075542 100075630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100077303 100077357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (396 nt):
ATGGAAACTCAGGCTGATCTCGTATCTCAGGAACCTCAGGCCCTGCTTGACAGTGCTCTTCCTTCAAAAG
TTCCTGCCTTTTCCGACAAGGACAGCCTGGGGGATGAGATGTTGGCGGCTGCGCTCCTAAAGGCCAAGTC
CCAGGAGCTGGTAACCTTTGAGGATGTAGCTGTGTACTTCATCCGGAAGGAGTGGAAGCGTTTGGAACCT
GCTCAGAGGGACCTCTATAGAGATGTGATGCTGGAGAATTACGGGAATGTGTTCTCACTGGACTGGATAC
ACGTCTGTTTAACTACGCAAAAGGTAATGCTGGCATGGCTTACTGGGACCCTAAGTGTGGCGAAGGGACT
CTGCTCCAGTGAACTGGCGAGTGTGGAACCTCCTGACACCTTCTGA

Translation (131 aa):
METQADLVSQEPQALLDSALPSKVPAFSDKDSLGDEMLAAALLKAKSQELVTFEDVAVYFIRKEWKRLEP
AQRDLYRDVMLENYGNVFSLDWIHVCLTTQKVMLAWLTGTLSVAKGLCSSELASVEPPDTF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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